KEGG T00749: Gbem

Geobacter bemidjiensis: Gbem_0704

Entry

Gbem_0704 CDS T00749

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

gbm Geobacter bemidjiensis

Pathway

gbm00020	Citrate cycle (TCA cycle)
gbm00310	Lysine degradation
gbm00380	Tryptophan metabolism
gbm01100	Metabolic pathways
gbm01110	Biosynthesis of secondary metabolites
gbm01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:gbm00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:gbm00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:gbm00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh Amidase_3

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

832577..835270

AA seq 897 aa
MMGILDNLSPLWIENQYEVWKKDPEQLSEAWRAFFNGFELGVNQPPQEAATLGLKEALKH
SGVQSLIYRYRDIGHLLACTDPLSPCQIEHPLLSLDAFGLEPSDLDKTFHTKRFMKQSAT
LKEILQVMRSTYCGSVGVEFMHLQNPEERQWLIDRMEPLANRGRFDAEKRLRLLKKLKEA
ALFERELHKKFPGQTRFSLEGGDALIPLLDAAVVKAAELGVTDVVFGMPHRGRLNVLANV
FGMPYENLFAEFGDNTEYGVVGEGDVKYHKGYSVDLILTGEHAIHLTLTSNPSHLEAIDP
VVQGKCRARQDRMGDGAEARVLPLLIHGDAAFAGQGVVAETLNLSQLAGYRTGGTLHVVL
NNQIGFTTSAADARSSHYATDVAKMVRAPVFHVYGDDAEAVVHIAQLALEYRDRYRKDVV
VEVICYRRHGHNEGDEPYFTQPLMYEQIKLRPPLHSLYEMELQGEGFAEEELKEVENEVV
QRLAQAGGKSAEPVESAFLARWSGMKPGTEKAPVSTAVAAASLMELSEKLSLIPDGFQPH
PKVTGILQKRREAVLKGGPLDWGNVEALAFGTLLAQGVPVRLSGQDVRRGTFSHRHAVLF
DQQNGSSYLPLSRAGAQGAPFCVYDSMLAEFSVLGFEYGYSIEAPEALTIWEAQYGDFVN
GAQVIIDQFIVSGEAKWGRSSGLVLMLPHGYEGQGAEHSSARIERFLELAAAGNIQVVYP
TTPAQLFHVLRRQMLQPFRKPLILFTPKSLLRHPDCVSKLEELSSGGFKEVISEPPAGGE
VQEVLLCSGKIYYDLLGRIRKDQVQGRALVRIEQLYPLPMDLLREELQRYPSGVRYSWVQ
EEPRNMGGWRFLHEPLCEILGVVPRYVGRPEAAAPASGSHRLDRVEQERIIEDALQR

NT seq 2694 nt +upstreamnt +downstreamnt
atgatggggatattggacaacctgagtccgctttggatagagaaccagtacgaggtatgg
aagaaggatccggagcagctttccgaggcgtggcgcgccttcttcaacggcttcgaactg
ggagtcaatcaaccgccccaagaggccgccactcttgggctgaaggaggctttgaagcac
tcgggggtccaatctctcatctaccgctaccgcgacatcgggcacctgctcgcctgcacc
gacccgctttctccctgccagatagaacacccgctcctctccctggacgccttcggcctg
gagccgtccgacctcgataagaccttccataccaagcgtttcatgaagcaaagcgccacc
ctgaaggagatcctgcaggtgatgcgcagcacctactgcggctccgtcggcgttgaattc
atgcacctgcaaaaccccgaagagcggcagtggctcatcgaccgcatggagcccctggcg
aaccggggacgcttcgacgccgaaaagcggctcaggctcttgaagaagctcaaagaggcg
gcgcttttcgaacgcgaactgcacaagaagtttccgggacagacccgcttctcgctggaa
gggggggacgccctgatcccgcttttggacgccgccgtagtgaaagccgccgagctcggc
gtcaccgacgtcgtcttcggaatgccgcaccgcggccgcctcaacgtcttggccaacgtc
ttcggcatgccttacgagaacctcttcgccgaattcggcgacaacacggaatatggcgtc
gtcggcgagggagacgtcaagtaccacaagggctattccgtcgatctcatcttgaccgga
gagcacgccatccacttaaccctcacttccaacccgagccaccttgaggcgatcgacccg
gtggtgcaggggaaatgccgggcccgccaggaccggatgggggatggagcggaggcccgg
gtgctgccgctattgatccacggggacgcggctttcgcggggcaaggggtggtggcggag
accttgaacctctcgcagcttgccggctacaggaccggcggcacgctgcacgtcgtcctc
aacaaccagatagggttcaccacctcggccgccgacgcccggtccagccactacgccacc
gacgtggctaagatggtgcgggcgccggtcttccatgtctacggggacgacgccgaggcg
gtggtgcacatcgcccaactggcgctcgagtaccgggaccgctaccgaaaggacgtggtg
gtcgaggtgatctgctaccgcaggcacggccacaacgagggggacgagccctacttcacc
cagccgctcatgtacgagcagatcaagctgcgccccccgctgcactcgctctacgagatg
gagctccagggagagggattcgccgaggaggagttgaaggaggttgagaacgaggtggtg
cagcgcctggcacaggcaggggggaaaagcgcggagccggtcgagagcgccttcctggca
cgctggagcggcatgaagcccgggaccgaaaaggcacccgtctccaccgcggtggcggcg
gcttcgctcatggagctctcggaaaagctcagcctcatcccggacggcttccaaccgcac
cccaaggtgacgggcatactgcagaagcggcgcgaggctgtattgaaaggtggaccgctc
gactgggggaacgtggaggcgctggccttcggcaccctgctggcgcagggagtcccggtt
cgcctttcggggcaggacgtcaggcgcggcaccttcagccaccgacacgccgtcctcttc
gatcagcaaaacggcagctcctacctccccttgtcgagagccggtgcgcaaggggcgccc
ttctgcgtctacgacagcatgcttgccgagttctcggttctggggttcgagtacggctat
tccatcgaggcgcccgaggcgctcaccatctgggaagctcagtacggcgacttcgtcaac
ggcgcgcaggtgatcatcgaccagttcatcgtgagcggcgaggccaagtgggggcgctcc
agtggtctcgtgctgatgctcccgcacggctacgaagggcagggggccgagcattccagc
gctcgcatcgagcgcttcctcgaactggctgcggccggcaacatccaggtcgtctacccc
accacgcccgcgcagctcttccacgtgctcaggcggcagatgctgcagcctttccgcaag
ccgctcatccttttcacccccaagagcctgctgcggcaccccgactgcgtctccaagctg
gaggagctttcctccggcggcttcaaagaggtgatctcggagccaccggcgggtggagag
gtgcaagaggtgcttctttgcagcggcaagatctactacgaccttctggggcggatcagg
aaggatcaggtgcaggggcgcgcgctggtgcgtatcgagcagctctaccccctgccgatg
gacctgctgcgggaggagttgcaacgctatccctccggcgtccgctacagctgggtgcag
gaggagcctcgcaacatgggagggtggcgattcctgcacgagcctctttgcgagatactc
ggggtggtgccccgttacgtcgggcggccggaagcagcggcgccggcctccggctcgcac
cggctggaccgggtggagcaggagcgcatcatagaggacgcgctgcagcgttga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (35)   

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