KEGG   Geobacter bemidjiensis: Gbem_0815Help
Entry
Gbem_0815         CDS       T00749                                 

Gene name
mutM-2
Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gbm  Geobacter bemidjiensis
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Gbem_0815 (mutM-2)
Enzymes [BR:gbm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Gbem_0815 (mutM-2)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Gbem_0815 (mutM-2)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
965421..966206
Genome map
AA seq 261 aa AA seqDB search
MPELPDLTIYAENLARKLTGKKIATVSFHDRGRLNVAPDELSAALIGAKVTAVRRTGKQV
SFQADNGAMLRVHLMLTGGFVLTSTEHLDRLEAPVVTVTFNDGSALAVSDPKGWATLTLN
PQPEREAPDALELSADQLQQLCAKQPKALIKALLLDQALIGGIGNAYADEILWEARISPK
SVAGKLPPEAVSALARAIPAVLKDAISELRKRHPDMVAGEYREFLKVHRPGLKQSPTGAP
VIKENISSKQTYYTDEQQLYK
NT seq 786 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgccggatctcaccatatacgcggagaacctggccaggaagctgaccggg
aagaagatagcgacagtttccttccatgacaggggacgtctgaacgtagctcccgatgaa
ctatccgccgcgctcataggtgcaaaggtcaccgccgtgcgcaggaccggaaagcaggtt
tctttccaggccgacaacggcgccatgttgcgggttcacctcatgctgaccggcggcttc
gtgctgaccagcaccgagcatctggaccgtctggaggcgccggtggtgactgtcaccttc
aacgacggttccgcgctcgcggtttcggatcccaaggggtgggcgacgctcaccttgaac
ccgcagccggagcgggaggcgccggacgccttggagctaagcgccgatcagttgcagcag
ctgtgcgcgaagcagccgaaggcgctgatcaaggcgctgctcctggaccaggcgctcatc
ggcggcatcggcaacgcctacgccgacgaaatcctgtgggaggcgcgcatctcccccaaa
tcggtggcgggaaagcttccccccgaggcggtctcggcgctggcgcgggccattcccgcc
gttctcaaggacgccatatcggaactccgcaaacgccacccggacatggtcgccggcgag
taccgcgagtttctcaaggtgcaccgccccggcctgaagcaatcccccaccggcgcgccc
gtcatcaaggagaacatctcctccaagcagacctactacaccgacgaacagcagctctac
aaataa

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