KEGG   Geobacter bemidjiensis: Gbem_1221Help
Entry
Gbem_1221         CDS       T00749                                 

Definition
helicase, RecD/TraA family
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gbm  Geobacter bemidjiensis
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    Gbem_1221
Enzymes [BR:gbm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Gbem_1221
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
1414186..1416381
Genome map
AA seq 731 aa AA seqDB search
MKETPPTENVDRLSGSLERVTFHSEETGFCVLRVKVAGQRDLVTVTGAAASVTPGEYLEC
TGSWHNDRTHGMQFKAGHIKVVPPTTLEGIEKYLGSGMVHGIGAHFAKVLVKSFGAAVFD
VIENHPERLLELPGIGRKRMESVAGAWVEQKAIRDIMVFLQSNGLGTARAVRIYKSYGNE
AIFKVTENPYRLALEIHGIGFKTADLLAAKLGIAPDSMIRAQAGVRHVLQEMSAGGHCAS
LRAELAESAATLLEIPQPVIESAIEAELAEENLVADQISGSPCVFLAPLYKAEVGVASGI
CRLRAGTPPWGGIVAEEAIPWVESQKGITLSASQRDAIRLALKSKVVVVTGGPGVGKTTL
VNSILGVIGRRPLRVTLCAPTGRAAKRLAESTGMEAKTIHRLLEFDPQTFGFKRCKENPL
HTDLLVMDEASMVDVVLMNKLLPAIPDHAGLIIVGDVDQLPSVGPGCVLSDIIESGAVPT
VRLTEIFRQAAGSRIIVNAHRINRGELPLKDEGKELADFYFIPAATPEDIHDKLLQVVRE
RIPKRFGFDPVREVQVLTPMNRGGLGTRSLNAELQGVLNGRAEPKVERFGTSYAPGDKVI
QTVNNYEKEVFNGDIGRIVEIRSEESALIVDFDDRLVEYAFAELDEVSLAYATSIHKSQG
SEYTAVVIPLAMQHYTMLERNLLYTAVTRGKKLVVVIGEQKALAMAVQNQKSHRRLTKLA
GRIGQKGDGIT
NT seq 2196 nt NT seq  +upstreamnt  +downstreamnt
atgaaagagacacccccaacagaaaacgtcgacaggctctccggatcgctggagcgcgtc
acctttcacagcgaggagaccgggttttgcgtgctgcgggtgaaggttgccgggcagcgc
gacctggtgacggtgacgggcgccgcggcctcggttacgccgggggagtaccttgagtgc
accggctcctggcacaacgaccggacccacggcatgcagttcaaggccgggcacatcaag
gtggttccccccaccacgctggaagggatcgagaagtacctgggtagcggcatggtgcac
ggcatcggggcccacttcgccaaggtgctggtgaaatcgttcggcgcggcggtcttcgac
gtcatagagaaccacccggagaggctcctggaactcccggggatcggccgcaagcggatg
gaatcggtcgccggcgcctgggtggagcagaaggcgatccgggacatcatggtgttcctg
cagtccaatggccttggaaccgcccgcgccgtgaggatctacaagagctacggcaacgaa
gcgatcttcaaggtgaccgaaaacccgtaccggctggccctggagatccatggcataggt
ttcaagactgccgacctcctggctgccaagctggggatagcgcccgattccatgatccgg
gcccaggcgggggtgcggcacgtgctgcaggagatgtcggccggcgggcactgcgccagc
ctgcgggcggaactggccgagagcgcagctactctgctggagatccctcaaccggtaatc
gaatccgccatcgaggcggaactcgccgaggagaacctggtcgccgaccagatctccggc
tccccctgcgtcttcctggcgccgctctacaaggcggaggtaggcgtagcctccggcatt
tgccggcttcgcgccggcacgcccccttggggcggcatcgtcgccgaagaggcgatcccg
tgggtggagagccaaaaaggaatcaccctttccgcctcgcagcgcgatgcgattcggctc
gcgcttaagagcaaggtggtcgtggtgaccggcggaccgggggtgggtaagaccacgctg
gtcaacagcatcctgggtgtcatcggcagaaggccgctccgggtcaccctctgcgcgccg
acggggagggcagccaagcgcctcgccgaatcgaccgggatggaggcgaagaccatccat
cggctcttggagttcgacccgcagaccttcggcttcaagcgctgcaaggagaacccgctt
cacaccgacctcctggtcatggacgaggcgtccatggtcgacgtcgtgttgatgaacaag
ctccttcccgccattcccgaccatgccggcctcatcatcgtgggggacgtggaccagctc
ccctcggtggggccaggctgcgtcctctccgacatcatcgagtccggcgcggttccgacg
gtacggctcaccgagatcttccggcaggccgcaggctccaggatcatcgtcaacgcccac
cgcatcaaccggggtgagctgccgctgaaggacgaggggaaggagctcgccgacttctac
ttcatcccggcggcgacgcccgaggatatccacgacaagctcctgcaggtggtcagggag
cggatacccaagcgcttcggcttcgatccggtgcgcgaggtccaggtgcttacgccgatg
aaccgcggggggctcgggaccaggtccctcaacgccgagttgcagggggtgctgaacggc
agggccgagccgaaggtggagcgcttcggcaccagctacgcccccggggacaaggtgatc
cagacggtgaacaactacgagaaggaggtcttcaacggggacatcggacgcatagtcgag
atccgctccgaagaaagcgccctcatcgtggacttcgatgaccggctggtggaatatgca
ttcgccgaactggacgaggtgagccttgcctacgccaccagcatccacaagagccagggg
tccgagtacacggccgtggtgatcccgcttgccatgcagcactacaccatgctggagcga
aacctcctgtacaccgccgtcacccgcggcaagaagctcgtggtggtgatcggcgagcag
aaggcgctcgccatggcggtgcaaaaccagaagtcccaccgccgcctgaccaagctggcg
gggaggatcggacagaaaggagacgggataacatga

DBGET integrated database retrieval system