KEGG   Geobacter bemidjiensis: Gbem_1958Help
Entry
Gbem_1958         CDS       T00749                                 

Gene name
trpB2
Definition
tryptophan synthase subunit beta
Orthology
K06001  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
gbm  Geobacter bemidjiensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Gbem_1958 (trpB2)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Gbem_1958 (trpB2)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Gbem_1958 (trpB2)
Enzymes [BR:gbm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Gbem_1958 (trpB2)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
2262203..2263558
Genome map
AA seq 451 aa AA seqDB search
MNTKFMLDESRIPKQWYNIIPDMPGPLHPVVNPQTLKPVTPEDMSVIFPMSLIEQEMSTE
RWIDIPEDVREKYRLWRPAPLFRARRLEQALQTPAKIYYKYEGVSPAGSHKPNSAIPQAY
YNKQAGIRRLATETGAGQWGSSLALACSMFGLECTIYMVKVSCTQKPYRKSMMQLWGATV
IPSPSEFTNAGRSILAHDPNNLGSLGIAISEAVEDAATHDDTNYALGSVLNHVCLHQTVI
GLEAKEQMELAGDYPDIVIACCGGGSNFAGLAFPFLSDRANGKKVRCLAVEPASCPTLTK
GIYAFDYGDTAKLAPITKMYTLGHDFMPPGIHAGGLRYHGESALISQLYHAGEIEAKSYK
QNACFEGALLFARSEGIVPAPESSHAVRAAIDEAVLAKEEGKEKTILFGLSGHGQLDMMA
YDAYLSGALEDFEYPEEMIRQSLERLPKVSF
NT seq 1356 nt NT seq  +upstreamnt  +downstreamnt
atgaataccaagtttatgctcgatgaatcccgcatccctaaacagtggtacaacatcatc
cccgacatgcctgggccgctgcatcctgtcgtaaacccgcagaccctgaagccggtgact
ccggaggacatgagcgtcatcttccccatgtcgctgatcgagcaggagatgtcgaccgag
cgttggatcgatattcccgaagacgtgcgcgagaaataccggctctggcggccggccccg
cttttcagggccagaaggctggagcaggcgctgcagaccccggcgaagatctattacaag
tacgaaggggtctcgcccgccggctctcataagccgaactccgccatcccgcaggcctac
tacaacaagcaggcgggtatccgcaggctcgccaccgagaccggcgcggggcaatggggt
agctcgctggctctggcctgctccatgttcgggctggagtgcaccatctatatggtgaag
gtctcctgcacccagaagccgtaccgaaagagcatgatgcagctttggggcgcgacggtg
atcccgtccccctccgagttcaccaacgcggggcgctcgattctggcgcatgacccgaac
aacctgggaagcctcggcatcgccatctccgaggcggtagaggacgcggcgacccacgac
gacacgaactacgcgctggggagcgtcttgaaccacgtctgcctgcaccagaccgtgatc
gggctggaggcgaaggagcagatggagctggccggggattacccggacatcgtcatcgcc
tgctgcggcggcggctccaacttcgccgggctcgccttccccttcctctccgaccgcgcc
aacgggaaaaaggtgcgctgcctggcagtggagccggcttcctgcccgaccctgaccaag
gggatttacgccttcgattacggcgacacggcgaagctcgcccccatcaccaagatgtac
accctggggcacgacttcatgccgccggggatccatgccggcgggctgcgttaccacggc
gagtccgcgctcatctcccagctctaccacgccggagagatcgaggcgaagtcgtacaag
cagaacgcctgcttcgaaggggccctgctcttcgccaggagcgaggggatcgttccggcg
ccggaatcctcccatgcggtgcgcgccgccatcgacgaggcggtgctggccaaggaggaa
gggaaggagaagaccatcctcttcgggctttccggccacgggcagctcgacatgatggct
tacgacgcctacctctccggcgcgctcgaggacttcgagtaccccgaggagatgatccgg
caatcgctggagcggctgccgaaggtttccttctag

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