KEGG T00749: Gbem

Geobacter bemidjiensis: Gbem_2900

Entry

Gbem_2900 CDS T00749

Gene name

mdh

Definition

malate dehydrogenase

Orthology

K00024

malate dehydrogenase [EC:1.1.1.37]

Organism

gbm Geobacter bemidjiensis

Pathway

gbm00020	Citrate cycle (TCA cycle)
gbm00620	Pyruvate metabolism
gbm00630	Glyoxylate and dicarboxylate metabolism
gbm00680	Methane metabolism
gbm01100	Metabolic pathways
gbm01110	Biosynthesis of secondary metabolites
gbm01120	Microbial metabolism in diverse environments

Module

gbm_M00168

CAM (Crassulacean acid metabolism), dark

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:gbm00020]
Metabolism; Carbohydrate metabolism; Pyruvate metabolism [PATH:gbm00620]
Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:gbm00630]
Metabolism; Energy metabolism; Methane metabolism [PATH:gbm00680]

SSDB

Motif

Pfam:

Ldh_1_N Ldh_1_C UDPG_MGDP_dh_N NAD_binding_10

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3344407..3345360)

AA seq 317 aa
MARKKIALIGGGQIGGVLAQLAALRELGDVVMFDIVEGLPQGKMLDIAEVGSVDGFDCNL
KGTNSYEDIKGADVVIVTAGLPRKPGMSRDDLIEVNSKIMTSVAEGIKANAPNAFVIVIS
NPLDAMVTLCQKITGFPYNRVIGQAGVLDSARFKTFIAWELGVSVKDVNAMTLGGHGDDM
VPLVRYASVNGIPVMELLEKKYKDKAKAKEVMEAMVKRTRGAGGEVVALLKTGSAFYSPA
SSAIQMAESILKDQKRVLPTCAHLNGEFGVKGFYVGVPCVLGENGVEQILEFELDAEEQA
MMDKSVAAVKELVGSMK

NT seq 954 nt +upstreamnt +downstreamnt
atggcacgtaagaaaatcgcacttatcggtggtggacagattggcggcgtacttgctcag
cttgcagctctgcgcgaactgggtgacgtagtaatgttcgacatcgtcgaaggcctgccg
cagggcaagatgctcgacatcgccgaagtcggctctgtcgacggcttcgactgcaacctg
aaagggaccaacagctacgaggacatcaaaggcgccgacgtggtcatcgtcaccgcaggc
cttccccgcaaaccgggcatgagccgcgacgacctgatcgaggtcaactccaagatcatg
acctccgtggctgaggggatcaaggccaacgcacccaacgcgttcgtcatcgtcatctcc
aacccgctcgacgccatggttaccctctgccagaagatcaccggcttcccctacaaccgc
gtcatcggccaggccggcgtgctcgactccgcacgcttcaaaaccttcatcgcttgggaa
ctgggcgtttccgtgaaagacgtcaacgccatgaccctgggcggccacggcgacgacatg
gtgccgctggtacgttacgcctctgtgaacgggatccccgtcatggaactcctcgagaag
aaatacaaagacaaagccaaggctaaagaagtcatggaagccatggtcaagaggacccgc
ggtgcaggcggcgaggttgttgctctcctcaaaaccggttccgcattctactccccggct
tcctccgccatccagatggctgaatcgatcctcaaggatcaaaagcgcgtcctcccgacc
tgcgctcacctgaacggcgagttcggcgtgaaaggcttctacgtcggcgttccctgcgtg
ctgggcgagaacggcgtcgagcagatcctcgagttcgaactggacgcagaagagcaggcg
atgatggacaagtccgtcgcagccgtcaaggaactcgtaggttccatgaagtaa

All links

Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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