KEGG   Geobacter bemidjiensis: Gbem_3223Help
Entry
Gbem_3223         CDS       T00749                                 

Gene name
sucC-3
Definition
(GenBank) succinyl-CoA synthetase, beta subunit
  KO
K01903  succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
Organism
gbm  Geobacter bemidjiensis
Pathway
gbm00020  Citrate cycle (TCA cycle)
gbm00640  Propanoate metabolism
gbm00660  C5-Branched dibasic acid metabolism
gbm01100  Metabolic pathways
gbm01110  Biosynthesis of secondary metabolites
gbm01120  Microbial metabolism in diverse environments
gbm01130  Biosynthesis of antibiotics
gbm01200  Carbon metabolism
Module
gbm_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Metabolism
  Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    Gbem_3223 (sucC-3)
   00640 Propanoate metabolism
    Gbem_3223 (sucC-3)
   00660 C5-Branched dibasic acid metabolism
    Gbem_3223 (sucC-3)
Enzymes [BR:gbm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.5  succinate---CoA ligase (ADP-forming)
     Gbem_3223 (sucC-3)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: ATP-grasp_2 Ligase_CoA ATP-grasp_5 GARS_A CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: ACH40222
JGI: Gbem3223
UniProt: B5E9P8
Position
complement(3710417..3711586)
Genome map
AA seq 389 aa AA seqDB search
MNVHEYQAKAILRKFGVPVPDGHVCYNGASAREWAKRLGEGPWVVKAQIHAGGRGKGGGV
KLARTSSEVQMIARDMLGMTLRTHQTGPEGKVVHRVLVECGCNIGSELYVSLLVDRATSR
VTVMASTEGGMDIEEVAAKTPEKIFTEAVDPLVGLTPFQCRKIAFSLGLRGKLTGKAVKV
FTSLYNTFIATDCSLLEINPLVVTAEGELIALDAKFGFDDNALFRHLQIGDMRDFDEEDA
NEIEASQHDLSYISLTGNIGCLVNGAGLAMATMDIIKHYGGDPANFLDVGGGATIERVTE
AFKIILSDKNVKGILVNIFGGIMKCDVIATGVIEAARQVGIQVPLVVRLEGTNVELGKRL
LAESGLNIVAADGMADGAQKIVRAVAAQA
NT seq 1170 nt NT seq  +upstreamnt  +downstreamnt
atgaacgtccacgagtaccaggctaaagcaattctgcgcaagttcggggtgccggttccg
gatggccacgtgtgctacaacggtgccagtgccagggaatgggccaagcggctcggcgag
ggaccttgggtggtcaaggcccagatccatgccgggggccgcggcaaggggggaggcgtc
aaattggcgcgcacctcgagcgaggtgcagatgatcgcccgcgacatgctcggcatgacc
ctcaggacgcaccagaccgggccggaagggaaggtggtgcaccgggtcctggtcgagtgc
ggctgcaacatcggcagcgaactgtacgtgagcctcttggtggaccgcgccacttcacgc
gtcacggtcatggcctccaccgagggggggatggacatcgaagaggtggccgcgaagacc
ccggagaagatcttcaccgaggcggtcgatccgctggtggggctgactcccttccagtgc
cgcaagatcgccttcagcttggggctcagggggaagctcacggggaaggccgttaaggtt
ttcacctccctctacaacaccttcatcgctaccgactgttcgctcttggagataaacccc
ttggtcgtcacggccgaaggggaactgatcgcgctggacgcgaaattcggcttcgacgat
aacgcgctcttccgccacctgcagataggcgacatgcgggacttcgacgaggaggacgcg
aacgagatcgaggcatcccagcacgacctctcctacatctcccttaccggcaacatcggc
tgccttgtcaacggcgccggcctcgccatggccaccatggacatcatcaagcactacggc
ggcgacccggcgaacttcctggatgtcgggggcggggccaccatcgagcgcgtcaccgag
gccttcaagatcatcctgtcggataaaaacgtgaaggggatcctggtcaacatcttcggc
gggatcatgaagtgcgacgtcatcgctaccggggtcatcgaagcggcgcggcaggtcggc
atccaggtgcctctcgtggtcaggctggaagggaccaacgtggagttgggcaagcggctt
ctggctgaaagcgggctgaacatagtagctgccgacggcatggccgacggggcgcagaaa
atagtgcgggccgtagcggcccaagcctag

DBGET integrated database retrieval system