KEGG   Geobacter bemidjiensis: Gbem_3321Help
Entry
Gbem_3321         CDS       T00749                                 

Gene name
trpB1
Definition
(GenBank) tryptophan synthase, beta subunit
  KO
K01696  
tryptophan synthase beta chain [EC:4.2.1.20]
Organism
gbm  Geobacter bemidjiensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of antibiotics
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Gbem_3321 (trpB1)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Gbem_3321 (trpB1)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Gbem_3321 (trpB1)
Enzymes [BR:gbm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Gbem_3321 (trpB1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(3818180..3819370)
Genome map
AA seq 396 aa AA seqDB search
MSTPDTSGHFGRFGGRYVSETLMPALLELEEAYNHYRTDKGFKEEYAYYMRQYVGRPNPL
YFAEKLTRKLGGAKVYLKREDLNHTGAHKVNNAIGQALLARKMGKKRVIAETGAGQHGVA
TATVAALFGMECEVFMGEEDIRRQSLNVFRMKLLGAKVTPVTSGTATLKDAMNEAMRHWV
TYVTDTFYIIGTVAGPHPYPAMVRDFQAIIGDEARAQHLEAEGKLPDYLVAAVGGGSNAI
GLFHAFSDDASVKMVGVEAAGYGIESGKHAAPLCAGTVGVLHGNKTYLLQDGFGQIAHAH
SISAGLDYPGVGPEHAFLKESGRASYVSVTDQEALDAFQVLTREEGIIPALESSHAVAHV
LRLAPTLSSNESIVVCLSGRGDKDIHTVAEVMGVQL
NT seq 1191 nt NT seq  +upstreamnt  +downstreamnt
ttgagcacgcctgacactagtggacatttcggccgtttcggcggcagatacgtctccgaa
accctgatgccggcgctcctcgaacttgaggaagcgtacaaccattaccggaccgacaag
gggttcaaggaggagtacgcgtactacatgcggcagtacgtcggacgccccaacccgctc
tactttgccgagaaactgacccggaagcttgggggcgccaaggtctacctgaagcgcgag
gacctgaaccacaccggcgcccacaaggtgaacaacgccatcggccaggcgctgctcgcc
aggaagatggggaaaaagagagtgatcgccgagacgggcgccgggcagcacggcgtggcg
accgcgacggtggcggctttgttcggcatggagtgcgaagtgttcatgggggaggaggac
atccggcgccagtccctcaacgtgttcaggatgaaactcctgggggcgaaagtgaccccg
gtcacctccggcacggcgaccctcaaggacgccatgaacgaggccatgcgccactgggtc
acctatgtcaccgacaccttctacatcatcggcaccgtggcgggacctcacccgtacccg
gcgatggtgcgcgacttccaggccatcatcggcgacgaggcgagggcgcagcacctggag
gcggaaggaaaactccctgactacctggtggcggcggtcggaggggggagtaacgccatc
ggcctcttccacgctttcagcgacgacgcgagcgtgaagatggtcggggtcgaggcggcc
ggctacggcatcgagtccggcaagcacgcagcaccgctttgcgccgggactgtcggtgtc
ttgcacggcaacaagacctacctgttgcaggacggtttcgggcagatcgcccacgcccac
tccatttcggcggggctcgactatccaggcgtgggacccgagcacgccttcctgaaggag
agcgggcgcgccagctacgtctccgtcaccgaccaggaggcactggacgcgttccaggtg
ctgacccgagaggagggtatcattccggcgctggaatcgtcgcacgcagtggcgcacgta
ctgcgtctggcaccgacactatcgtccaatgagagcatcgtggtctgcctttccggcaga
ggcgataaggacatccataccgtggccgaggttatgggggtacagctttaa

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