KEGG   Geobacter bemidjiensis: Gbem_3350Help
Entry
Gbem_3350         CDS       T00749                                 

Gene name
trpA
Definition
tryptophan synthase subunit alpha
Orthology
K01695  
tryptophan synthase alpha chain [EC:4.2.1.20]
Organism
gbm  Geobacter bemidjiensis
Pathway
Glycine, serine and threonine metabolism
Phenylalanine, tyrosine and tryptophan biosynthesis
Metabolic pathways
Biosynthesis of secondary metabolites
Biosynthesis of amino acids
Module
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:gbm00001]
 Metabolism
  Overview
   01230 Biosynthesis of amino acids
    Gbem_3350 (trpA)
  Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Gbem_3350 (trpA)
   00400 Phenylalanine, tyrosine and tryptophan biosynthesis
    Gbem_3350 (trpA)
Enzymes [BR:gbm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.20  tryptophan synthase
     Gbem_3350 (trpA)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3848588..3849391)
Genome map
AA seq 267 aa AA seqDB search
MSRISDRFASLKERGEKALVTFVTAGDPDLATTEKVVLELERAGADLIELGVPFSDPMAD
GPTIQLSSDRALASGTTLPAILELVSRLREKTQVPIVLMGYFNPIFAYGSERFAFDAAQA
GVDALLVVDLPPEEAAELKGATDSCGLDLIFLLTPTSDGSRIASVARQGSGFIYYVSVTG
VTGARSAVADDLAARVTEVRGALELPLVVGFGISTPEQAGEVARAADGVVVGSALVKYFE
KYQGAELLEQLGGFVSALKQGVLKGSR
NT seq 804 nt NT seq  +upstreamnt  +downstreamnt
atgagcaggatttcagatagatttgccagcctgaaagaacgtggggaaaaggcgctggtc
accttcgtcaccgccggcgacccggatctggcgactacggaaaaggtggtgctcgaactc
gaacgggcaggggccgacctgatcgagctgggagttcccttctccgatcccatggctgac
ggcccgaccatccagctctcctcggaccgggccctggcctccggcaccactctcccggca
atactggagctggtatcgaggctcagggaaaagacccaggtccccatcgtgctgatgggt
tacttcaaccccatcttcgcctacggttccgagcgctttgccttcgacgcggcacaagcc
ggcgtcgacgccctgctggtggtggatctcccccccgaggaggctgcggagctaaaagga
gctaccgacagctgcggactcgacctcatcttcctcctcaccccgacctcagacggctcc
cggatcgcttctgtcgcgcgccagggaagcggcttcatctactacgtctccgtcaccggc
gtcaccggcgcgcgtagcgcggtcgccgatgacctggcggcccgggtcaccgaggtgcgc
ggcgcgctggaactgccgcttgtggtcggcttcggcatctccaccccggagcaggcgggg
gaggtggcccgggcggccgacggcgtggtggtgggaagcgcgctggtgaagtacttcgag
aagtaccagggggccgaactcctggaacagctggggggattcgtctcggcgctaaaacaa
ggagtgctgaagggctcccggtaa

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