KEGG T00749: Gbem

Geobacter bemidjiensis: Gbem_3350

Entry

Gbem_3350 CDS T00749

Gene name

trpA

Definition

tryptophan synthase subunit alpha

Orthology

K01695

tryptophan synthase alpha chain [EC:4.2.1.20]

Organism

gbm Geobacter bemidjiensis

Pathway

gbm00260	Glycine, serine and threonine metabolism
gbm00400	Phenylalanine, tyrosine and tryptophan biosynthesis
gbm01100	Metabolic pathways
gbm01110	Biosynthesis of secondary metabolites
gbm01230	Biosynthesis of amino acids

Module

gbm_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:gbm00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:gbm00400]

SSDB

Motif

Pfam:

Trp_syntA PcrB His_biosynth BtpA Lipase_GDSL_2

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3848588..3849391)

AA seq 267 aa
MSRISDRFASLKERGEKALVTFVTAGDPDLATTEKVVLELERAGADLIELGVPFSDPMAD
GPTIQLSSDRALASGTTLPAILELVSRLREKTQVPIVLMGYFNPIFAYGSERFAFDAAQA
GVDALLVVDLPPEEAAELKGATDSCGLDLIFLLTPTSDGSRIASVARQGSGFIYYVSVTG
VTGARSAVADDLAARVTEVRGALELPLVVGFGISTPEQAGEVARAADGVVVGSALVKYFE
KYQGAELLEQLGGFVSALKQGVLKGSR

NT seq 804 nt +upstreamnt +downstreamnt
atgagcaggatttcagatagatttgccagcctgaaagaacgtggggaaaaggcgctggtc
accttcgtcaccgccggcgacccggatctggcgactacggaaaaggtggtgctcgaactc
gaacgggcaggggccgacctgatcgagctgggagttcccttctccgatcccatggctgac
ggcccgaccatccagctctcctcggaccgggccctggcctccggcaccactctcccggca
atactggagctggtatcgaggctcagggaaaagacccaggtccccatcgtgctgatgggt
tacttcaaccccatcttcgcctacggttccgagcgctttgccttcgacgcggcacaagcc
ggcgtcgacgccctgctggtggtggatctcccccccgaggaggctgcggagctaaaagga
gctaccgacagctgcggactcgacctcatcttcctcctcaccccgacctcagacggctcc
cggatcgcttctgtcgcgcgccagggaagcggcttcatctactacgtctccgtcaccggc
gtcaccggcgcgcgtagcgcggtcgccgatgacctggcggcccgggtcaccgaggtgcgc
ggcgcgctggaactgccgcttgtggtcggcttcggcatctccaccccggagcaggcgggg
gaggtggcccgggcggccgacggcgtggtggtgggaagcgcgctggtgaagtacttcgag
aagtaccagggggccgaactcctggaacagctggggggattcgtctcggcgctaaaacaa
ggagtgctgaagggctcccggtaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GBM (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (29)   

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