KEGG T01102: Gbro

Gordonia bronchialis: Gbro_0415

Entry

Gbro_0415 CDS T01102

Definition

ATP dependent DNA ligase

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

gbr Gordonia bronchialis

Pathway

gbr03410	Base excision repair
gbr03420	Nucleotide excision repair
gbr03430	Mismatch repair
gbr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:gbr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:gbr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:gbr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:gbr03450]

SSDB

Motif

Pfam:

DNA_ligase_A_M DNA_ligase_A_C mRNA_cap_enzyme

Other DBs

NCBI-GI:

262200434

NCBI-GeneID:

8549746

UniProt:

D0LDC9

Position

464156..465196

AA seq 346 aa
MPPISPMLAKAVTDIPAQPDDADPVWSYEPKWDGFRALIFRDGDEVSIGSRGGKDLARYF
PEIVAAAKEELPEKVVLDGEIGVPAEIGGTHRLDWDTLAQRIHPAASRVNMLAETTPAIF
IGFDALALESADVMAEPFEVRRDTLLRAVGPGGRDRRFHVSRVTADPTLAQDWFSAFEGA
GLDGVVGKRLAGTYVEGKREMVKVKHKRTADCVIIGYRVHKSGTGVGSMLLGLHTDDGDL
HMVGGSSAFSDKKRIELQEQFEPMRLDPDKPAAGEPTRWRSEKSGEWIPIRPELVAEFAY
DQMENHRFRHTVKFLRWRPDRDPESCGYDQLEVPLTYDLHDVLEGA

NT seq 1041 nt +upstreamnt +downstreamnt
atgccaccgatttcgccgatgctcgccaaggcggtcaccgacatacctgcccaacccgac
gacgccgacccggtgtggtcatacgagcccaagtgggatggcttccgcgcgttgatcttc
cgcgacggcgatgaagtgtccatcggttcgcgtggcggcaaggacctggctcgctacttt
ccggagatcgtcgctgcggccaaggaggaactgcccgagaaggtggtgctcgacggcgag
atcggtgtgcccgccgagatcggcgggacccatcgcctcgactgggacaccctggcccag
cgaattcatccagcagcctcgcgggtcaacatgctcgccgagacgaccccggccattttc
atcggattcgacgcgctggcgctggaatcggcggacgtgatggccgaaccgttcgaggtg
cggcgcgacacgctgctgcgggccgtcgggcccggtgggcgcgaccgtcgcttccacgtg
agccgggtgacagccgatccgactctcgcgcaggactggttctccgccttcgagggcgcg
ggcctcgacggtgtcgtcggcaaacggctggcgggcacgtatgtcgaaggcaaacgagag
atggtgaaggtcaagcacaagcggaccgccgactgcgtcatcatcggctaccgggtgcac
aagagcgggaccggcgtcgggtcgatgctgctcgggctgcacaccgacgacggtgacctg
cacatggtcggcggatcgagcgcgttctccgacaagaagcggatcgaattgcaggaacag
ttcgagccgatgcgtctggacccggacaagccggcggccggcgagccgacgcggtggcgg
tcggagaagtcgggggaatggataccgatccggcccgagcttgtcgccgaattcgcctac
gaccagatggagaatcaccggttccggcacaccgtcaagttcctgcggtggcgcccggat
cgcgacccggagagctgtggatacgatcagctcgaggtcccactgacctatgacctgcac
gacgtgttggaaggggcctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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