KEGG   Gordonia bronchialis: Gbro_2746
Entry
Gbro_2746         CDS       T01102                                 
Name
(GenBank) Exodeoxyribonuclease V
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
gbr  Gordonia bronchialis
Pathway
gbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Gbro_2746
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gbr03400]
    Gbro_2746
Enzymes [BR:gbr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Gbro_2746
DNA repair and recombination proteins [BR:gbr03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Gbro_2746
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 PDDEXK_1 AAA_11 AAA_25
Other DBs
NCBI-ProteinID: ACY21964
UniProt: D0L8X3
Position
complement(2925225..2928629)
AA seq 1134 aa
MTESTRAPHTFDIAEDLPAQTTVLEASAGTGKTYAIVSLAARYLAEGVPISGMLLVTFSR
AATAELRERMRERVHGLVGVLADPASAAQSADQLHRLLAAGTAEDVARRRAHLVRALSDF
DASTIATTHTFCNRMLEALGFLGEREMVYRIVEEVDELTDEVALDLYLRGFSTSEAPDFS
LAEAQRIARDAVRQAAVALAPEAAELQDAGEPGRVAARRVRFAARVRQIVEARKRTSRLR
TYDDLQTILHRIITDPDVGEAACRRIRSTFAVALVDEFQDTDPLQWDIVRRCFHGHRRLV
LVGDPKQSIYGFRGAEVLSYLSAVRSADTLRALDTNRRSDGDLVASLWTLYGGATLGHPG
IVVHPVGAAHAGSRLDGAVPMQVRAFMRTDFNRLNSLGVPSAPDARARITTDVADHISSA
LSAGMTIVVDGARRPVEPGDIAVLVRQNKTIEPLQTALAARGVNAVIGSGVNVFETSAAQ
HWLWVLRAVEQPSRPDRVRLAALTPLLGWTPERLAVQAETGTAELGAGFAALGQVFGECG
FAAMAQRLMAQENVAARVLAMRGGERLLTDLLQISALCNKQVVESGEGISGLVEWLADRI
ADSSRRQRHEDQSRRLERDTEAVQIMTVHASKGLQFPIVYVPFGWDGTWIDEEGDLTFHD
DEGTRLLDVAGPGAPGRGTRRARYAEEVAGEDLRLLYVALTRAQSQVVTWWAPTANTPTG
PLHRLIFGRQRALAERSGTDPQAPWTVAKSVDVPDDVECVTVLRQLAERDSRIEVSPAGR
LPTPPAGPAGDDPADLPVLSAAAFDRRIDQQWRRTSYSAIIAGAAHGPSAVETGSERDGA
RLDTALDDEPIEAPEPLAGNVIEDESGERTGTPSPMSGLSFGAGFGTLVHEVLEYVDTSA
PDIRSHVAQLVARAAGVRGGTVDVNVLTDALVGVLTTPLGFGDLWSIAPRDRLAELDFEL
PLGDDAASDETETGATVAEIADLMDRHLGADDPLRPYAQVLRGVPAARLRGFLTGSIDSV
LRVPDGRYVVVDYKTNRLRPGELMVEDFHSGAMATEMIHAHYPLQALLYSVALHRYLRWR
IAGYTPEHHLGGVQYHFVRGMAGPSTPPGCGVFEWKPPSELVTAISDLLAGVRR
NT seq 3405 nt   +upstreamnt  +downstreamnt
gtgacggaatcgacccgagcaccccacaccttcgacatcgccgaggacctccccgcgcag
acgacggtcctggaggccagcgcgggcaccggcaagacctatgcgatcgtcagcctcgcc
gcgcgctacctcgccgagggggtgccgatctccgggatgttgctggtcacgttcagccgc
gcggccaccgccgaactacgcgaacgcatgcgcgagcgggtccacggattggtcggcgta
ctcgctgatccggcgtcggcggcgcagtcggcggatcagctgcaccggctgctggccgcc
gggaccgccgaggatgtcgcgcggcgccgcgcccacctggtgcgggccctgtcggacttc
gacgcctcgaccatcgcgaccacccacaccttctgcaatcggatgctcgaggccctcggc
ttcctcggggaacgggagatggtgtaccggatcgtcgaagaggtcgacgaactcaccgac
gaggtcgcgctcgacctctatctccgcggcttctccaccagtgaggcaccggatttcagc
ctggccgaggcacagcggatcgctcgcgacgcggtccggcaggcggccgtggcgctagca
cccgaggcggccgaactgcaggacgccggggagcccggccgcgtggctgcgcggcgggtg
cggttcgcggcgcgggtacggcagatcgtcgaggcacgcaagcggacatcgcgactgcgg
acctacgacgacctgcagaccatcctgcaccgcatcatcaccgatcccgacgtcggcgag
gcggcctgccggcgcatccggagcaccttcgcggtggccttggtcgacgagttccaggac
accgatccgctgcaatgggacatcgtccggcgttgtttccacgggcaccggcgcctcgtg
ctggtaggcgatcccaaacagtccatctacggcttccggggcgcggaggtgctcagctat
ctgtccgcggtgcgttctgccgacaccctgcgcgccctggacaccaaccgccgctcggac
ggcgacctggtggcatccctgtggacgctctacggcggcgcgaccctggggcatccgggc
atcgtggtgcatccggtgggtgccgcccacgcgggcagtcgcctcgacggcgcggtaccg
atgcaggtgcgcgcgttcatgcggaccgatttcaaccggctgaactcgctgggggtgccg
tcggcgcccgatgcccgcgcccggatcaccaccgacgtcgccgaccacatctcctccgcg
ctgtccgccggcatgacgatcgtcgtcgacggtgcgcgacgaccggtcgaacccggtgac
atcgcggtcctggtgcgacagaacaagaccatcgaacctttgcagaccgcactcgcggcg
cgcggcgtgaacgcggtgatcgggtccggcgtcaacgtgttcgagacctcggccgcgcag
cactggttgtgggtgttgcgcgccgtcgaacagccgtcccgacctgatcgtgtccggctg
gcggccctcacaccgctactcggctggacaccggaacgccttgcggtgcaggcagagacg
ggcaccgccgaactcggtgccggattcgcagcgctcgggcaggtcttcggcgaatgtgga
ttcgccgcgatggcacaacgcctcatggcgcaggagaacgtcgcggcccgggtactcgcc
atgcgcgggggagagcggctgctcaccgatctcctgcagatctccgcactgtgcaacaaa
caggtggtcgagtccggcgagggcatcagcggtctggtcgaatggctcgccgaccggatc
gccgacagctcccgccggcagcggcacgaggaccagagccgacggctcgaacgcgacacc
gaggccgtccagatcatgacggtccacgccagcaagggattacagttcccgatcgtctac
gtcccgttcggctgggacggtacctggatcgacgaggagggggatctcaccttccacgac
gacgagggcacacgactcctcgacgtggccggaccgggcgcgccggggcgggggacgcgg
cgagcccgctacgccgaggaggtcgccggcgaggatctgcggctgctctacgtcgcgctc
acgcgggcgcagtcgcaggtggtgacgtggtgggcgccgacggccaacacgccgaccggt
ccgctgcaccggctgatcttcggtcgccaacgagcactggccgagcggtccggcaccgac
ccgcaagcaccctggaccgtcgcgaaatccgtcgacgtgcccgacgacgtcgagtgcgtc
accgtgcttcgccaactcgccgagcgtgattcgcgaatcgaggtgtcgcccgcgggccgg
ctgcccacacccccggccggaccggcgggagacgaccccgccgatctgccggtcctgagc
gcggcggccttcgatcgcaggatcgatcagcagtggcgtcgaacctcgtactccgccatc
atcgccggcgccgcgcacgggccgtcggcggtcgagacgggcagtgaacgcgacggtgcg
cgcctggacacggcactcgacgatgaaccgatcgaagcgccggaaccgctggccggcaac
gtcatcgaggacgagtcgggtgagcggaccggcacgccgtcgccgatgtccggactatcc
ttcggtgcgggtttcggcacactcgttcacgaggtcctggagtacgtcgacacctcagca
cccgacatccggtcgcacgtggcgcagctcgtcgcgcgcgccgcgggggtgcgtggtggc
accgtcgacgtcaatgtcctgaccgacgcgttggtcggtgtgctgaccaccccgctgggg
ttcggtgacctgtggagtatcgccccgcgggatcggctcgcggagttggacttcgagttg
ccgctcggcgacgacgccgcgtccgatgagaccgagaccggggcgacggtagccgagatc
gccgacctgatggatcgccacctgggtgctgacgacccgttgcggccatacgcgcaggta
ttgcgcggggtccccgctgcgcggctgcgcggcttcttgaccggcagcatcgactccgtg
ctgcgtgtcccggacggccgctacgtggtggtcgactacaagaccaaccggctgcgtccc
ggggagttgatggtcgaggacttccattccggggcgatggccaccgagatgatccacgcc
cactacccactgcaggcgttgctgtattccgttgcgctgcaccgatatctgcgatggcgg
atcgccggctacacgccggagcaccacctcggtggtgtgcagtaccattttgtgcgcgga
atggcgggaccgtcgacgccaccgggatgcggtgtcttcgaatggaaaccaccgtcggag
ctggtcaccgcgatctccgatctgctggcgggggtgcgccgatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (37)   

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