KEGG   Gordonia bronchialis: Gbro_2993
Entry
Gbro_2993         CDS       T01102                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
gbr  Gordonia bronchialis
Pathway
gbr03030  DNA replication
gbr03430  Mismatch repair
gbr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gbro_2993
   03430 Mismatch repair
    Gbro_2993
   03440 Homologous recombination
    Gbro_2993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gbr03032]
    Gbro_2993
   03400 DNA repair and recombination proteins [BR:gbr03400]
    Gbro_2993
Enzymes [BR:gbr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Gbro_2993
DNA replication proteins [BR:gbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Gbro_2993
DNA repair and recombination proteins [BR:gbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Gbro_2993
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 DNA_pol_IIIA_C tRNA_anti-codon
Other DBs
NCBI-ProteinID: ACY22201
UniProt: D0LAQ8
Position
complement(3199673..3203215)
AA seq 1180 aa
MTDSFVHLHNHTEYSMLDGAAKVAPLFAEAKRLGMTAIGMTDHGNMFGASEFYNTAVKND
IKPIIGIEAYVAPASRFETKRVTWGTRDQKDDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWARMDADIIAEYAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKWQEI
FGKENFYLELMEHGLEIERRVRDGLLEVGRKLGIKPLVTNDCHYVTKDHAKSHEALLCVQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRELWDSVVPGACDNTLEIGERVQSYADVFTHRDR
MPVFPVPEGESQQTWLRKEVAKGLAERRFAGAEVPREYQERANYELDVIIQMGFPAYFLV
VGDLIRHAQEVGIRVGPGRGSAAGSLVAWALGITNIDPIPHGLLFERFLNPERVSMPDID
IDFDDRRRGEMVRYATDRWGSDKVAQVITFGTIKTKAAIKDSARVQFGQPGFSIADRITK
ALPPPIMAKDIPVWGITDPDHERFNEAAEVRSLIETDPDVKKIYDTALGLEGLIRNAGVH
ACAVIMSSEPLTDAIPVWRRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDAIEN
IKINRGFDLDLDDAPLDDPKTYELLARGDTLGVFQLDGGAMRELLKRMQPTGFEDIVAVL
ALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELAEPLKEILADTYGLIVYQEQIMQIAQK
VAGYSLGRADILRRAMGKKKAEVLAAEFEGFEAGMKANGFSGPAIKALWDTILPFAGYAF
NKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAIYLADCRKLGITVLPPDV
NESQRNFAAVGTDIRFGLAAIRNVGSGVVSSILAAREEKGKFTSFSDYLGKIDVTACNKK
VTESLIKAGAFDSLAHPRKGLFLVHGEAVESVLGTKKAEAIGQFDLFGDAGGADDTMAEV
FAVKVPDEEWDTKHKLAIEREMLGLYVSGHPLSGVEHAIAAHTDTSITTLLEGNIADGAQ
ITIGGIISSVTRRVNKKGEPWAAVTLEDMVGGVEVYFFPRAFAAYGMDIVADNIVLIKAR
VNLRDDSMMISANDLAVPDLSSAGATKPVALTLSARLCTPDRVQALKQVLTRHPGSADVH
VTLVSDERQTQLRLTESLRVTPSSALMGDLKALLGPSCLG
NT seq 3543 nt   +upstreamnt  +downstreamnt
gtgaccgattcgtttgtccatctgcacaaccacaccgagtactcgatgctcgacggtgcc
gccaaggtggcgccgctgttcgcggaggccaaacggctgggcatgaccgccatcggcatg
accgaccacggaaacatgttcggcgccagtgagttctacaacacggcagtcaagaacgac
atcaagccgatcatcggcatcgaggcctacgtcgcgccggcgtcgcgcttcgagaccaag
cgcgtcacgtggggtacccgcgatcagaaggacgacgacgtctcgggtagcggcgcctac
acccacatgaccatggtggccgagaacgccaccggtctgcgcaacctgttcaagctgtcg
tcgctggcctccatcgaaggacagctcggcaagtgggcgcgcatggacgccgacatcatc
gccgaatacgccgagggcatcatcgcgaccaccggctgtccgtccggcgaggtccagacc
cgcctgcgcctcgggcatgagcgtgaggcgctcgaggcggcggccaaatggcaggagatc
ttcggcaaggagaacttctacctcgaactcatggagcacggcctcgagatcgagcggcgg
gtccgcgacgggctgctcgaggtcggccgcaagctcggcatcaaaccgttggtgaccaac
gactgccactacgtaaccaaggatcacgccaagagccacgaggcgctgctgtgcgtacag
accggtaagaccctctccgacccgacccgcttcaagttcgacggcgacggttactacctg
aagtccgccgccgagatgcgcgagctgtgggattcggtggttccgggcgcctgcgacaac
accctggagatcggcgaacgggtccagagctacgccgacgtcttcacccaccgcgaccgt
atgccggtcttcccggtgcccgaaggcgaatcccagcagacgtggttgcgcaaagaggtc
gccaagggtctcgccgaacgccgcttcgcgggcgccgaggtgccgcgggagtatcaggag
cgcgcgaactatgagctcgacgtcatcatccagatggggttcccggcctacttcctggtg
gtcggcgacctcatccggcacgcccaggaggtcggcatccgcgtcggaccgggccgtgga
tcggcggccgggtccctggtcgcgtgggcgttgggcatcaccaacatcgaccccatcccg
cacggactgctatttgagcggttcctcaaccccgaacgcgtctcgatgcccgacatcgac
atcgacttcgacgatcgtcggcgcggtgagatggtgcgctacgccaccgaccggtggggc
agcgacaaggtcgcccaggtcatcaccttcggcaccatcaagaccaaggctgccatcaag
gactccgcccgggtgcagttcgggcagcccggcttctccatcgccgaccggatcaccaag
gcgctgccgccgcccatcatggccaaggacatcccggtctggggcatcaccgatccggat
cacgaacggttcaacgaggccgccgaggtccgctcgctcatcgagaccgatcccgacgtc
aagaagatctacgacaccgcactgggcctggaaggcctgatccgcaacgccggtgtgcac
gcgtgtgcggtgatcatgtcctcggagccgctcaccgacgccatcccggtgtggcggcgc
gcccaggacggcgccatcatcaccggctgggattacccgtcctgtgaggccatcggcctg
ttgaagatggacttcctggggttgcgcaacctcaccgtcatcggtgacgccatcgagaac
atcaagatcaaccgcggcttcgatctcgacctcgacgacgccccgctcgacgaccccaag
acctacgagctgctcgcccgaggtgacacgctgggcgtgttccagctcgacggcggggcc
atgcgcgaactcctgaaacgcatgcagcccaccggattcgaggacatcgtcgccgtcctc
gcgctctatcggccgggtccgatgggcatgaacgcccacaacgattacgccgaccgcaag
aacggtcgccaagaggtcaaaccgatccatccggaattggccgagccgctcaaggagatt
ctcgccgacacctacggtctgatcgtctaccaagagcagatcatgcagatcgcgcagaag
gtggccgggtactcactcggccgagccgacatcctgcgccgcgcgatgggcaagaagaag
gccgaggtcctcgccgccgaattcgaggggttcgaggcgggcatgaaggccaacgggttc
tccgggccggccatcaaggcgctctgggacacgatcctcccgttcgccggatacgcgttc
aacaagtcccacgccgccggctatgggctcgtctcgttctggacggcctacctcaaggcg
aattatcccgccgagtacatggccgggctgctcacctccgtcggcgacgacaaggacaag
gccgcaatctatctcgccgactgccgcaagctcggcatcacggtgctaccacccgacgtc
aacgagtcccagcgcaacttcgcggccgtcggcaccgacatccgcttcggcctggccgcc
atccgcaacgtcggcagcggggtggtctcctcgatcctggccgcgcgcgaggagaaggga
aagttcaccagcttctcggactatctcggcaagatcgacgtcaccgcctgcaacaagaag
gtgacggaatcgctgatcaaggccggtgccttcgactcgctggcgcatccgcgcaagggt
ctgttcctggttcacggtgaggccgtcgaatcggtgctcggcaccaagaaggccgaggcc
atcggacaattcgatctgttcggcgatgcgggcggagccgacgacaccatggccgaggtc
ttcgcggtcaaggtgcccgacgaggagtgggacaccaaacacaaactcgccatcgagcga
gagatgttggggctctacgtgtccgggcatccgctcagtggcgtcgaacacgcgatcgcc
gcacacaccgacacctcgatcaccaccctgctcgaaggcaacatcgccgacggcgcccag
atcaccatcggcggcatcatctcgtcggtgacgcgccgggtgaacaagaagggcgaaccg
tgggcggcggtcaccctcgaggacatggtcggtggtgtggaggtgtacttcttcccgcgt
gctttcgccgcctacgggatggacatcgtcgccgacaacatcgtgctcatcaaggcgcgg
gtcaacctgcgcgacgattcgatgatgatctcggccaacgacctcgccgttcccgatctg
tcgtcggcgggcgccaccaaacccgtcgccctcaccctgtccgcgcggttgtgtacaccc
gaccgggtccaggccctcaagcaggtactcacccggcatcccgggagcgcggatgtgcac
gtcacgctggtcagtgatgaacggcagacgcaacttcggctcacggagtcactgcgggtg
acgccgtcgtcggcgctgatgggtgacctcaaggcactgctcggcccgagctgtctgggc
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (32)   

Download RDF
DBGET integrated database retrieval system