KEGG   Gallionella capsiferriformans: Galf_0470Help
Entry
Galf_0470         CDS       T01295                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gca  Gallionella capsiferriformans
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gca00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Galf_0470
Enzymes [BR:gca01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Galf_0470
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Galf_0470
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(512423..513253)
Genome map
AA seq 276 aa AA seqDB search
MPELPEVETTRRGLAPYLADATVTGVVTRTPSLRWPIPENLNELLNGQPVVSLSRRAKYL
LLEFRHGTLILHLGMSGSLRILPTGTAPQPHDHFDLLLDNGCLMRLRDPRRFGAVLWHQG
NINTHPLLVKLGPEPLDDRDGNCRFNAHYLYQATRGRRVAIKQFIMDSAIVVGVGNIYAS
EALFSAGINPLSKAGELSFAHCEKLADVIRSTLNEAILAGGSTLRDFVNASGNPGYFQQQ
HWVYSRAGEPCRICSAPIMQIKQGQRSSFYCTHCQK
NT seq 831 nt NT seq  +upstreamnt  +downstreamnt
gtgcctgaactgccagaggttgagacgacccggcgcggattagcgccttaccttgcagat
gcgaccgtcacaggggtcgtcacgcgcacccctagcctgcgctggccgataccggaaaat
cttaacgaactgctaaacgggcagcccgtcgtgtcattatcgcgccgcgccaaatacctg
ctgctcgaatttcgccacggcacgctgattctgcatctggggatgtcaggcagtctgcgc
atcctgccgaccggcacagcacctcagccgcacgaccatttcgatctgctactcgataac
ggatgcctgatgcgattgcgcgatccgcgccgcttcggtgccgtgctctggcatcagggg
aatatcaatacgcacccgctgctggtaaaactgggccccgaaccgctcgatgatcgcgat
ggcaactgcaggtttaatgcacactatctctatcaggcaacgcgcggacgccgcgttgca
atcaagcaattcatcatggacagtgccatcgtcgtcggcgtaggcaacatttacgccagc
gaagcactgtttagcgccggcatcaatccgctgagcaaagcgggggaattaagctttgcg
cactgcgaaaaactggcagatgtcatacgctcaacattaaacgaagccatactggccgga
ggcagtacgctgcgcgatttcgtcaacgcttcgggcaatccgggttatttccagcaacag
cattgggtctacagccgggcaggagaaccttgccgcatctgcagcgcaccgatcatgcag
attaaacagggacagcgttcaagtttttattgcacccattgccaaaaataa

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