KEGG T01295: Galf

Gallionella capsiferriformans: Galf_1428

Entry

Galf_1428 CDS T01295

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

gca Gallionella capsiferriformans

Pathway

gca00473	D-Alanine metabolism
gca00550	Peptidoglycan biosynthesis
gca01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:gca00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:gca00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C ATP-grasp_4 GARS_A RimK

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(1562835..1563830)

AA seq 331 aa
MIHSNTVFPFRDVVLIADKLGESEKLTPIHKRRDLEMTDAQTLDTLRSTINSLGLRVHTY
NGPDDLAKNAALHSNDIVLSIYGGRASRNRMALVPAICETFGLRFIGPDVYGRIVAQDKE
VTKRLASDCGIITPAWRIVRSVEDLRYISGLRLPVVIKPLMEGSSIGIAQRNRVVDVADV
LPLAKELLETFNQPVLIEEFVAGREVAYSKIQHAGAESWAFSEVVIEGNDDYFTNHLFDA
DEKLIPTVGRTIRNIDHELHANDRAAIDTFLTMFGAYGYCRVDGRLADGNFHFLELTPDA
WIAPRGQFARGFTEKGWSYAEVIAAVLASVD

NT seq 996 nt +upstreamnt +downstreamnt
atgattcattcaaatacggtattcccctttcgagatgtcgttcttattgccgacaaacta
ggcgagagcgaaaaacttacgccaattcataaaagacgtgatttggaaatgacggacgcg
cagacgctcgacactttgcgttccacgatcaatagtctcgggttgcgcgtccatacatac
aatggaccggatgatttagccaaaaacgccgcacttcacagtaacgatatcgtgttatcc
atttacggtgggcgcgcatcccgcaaccgaatggcgcttgttcctgcgatttgtgaaact
tttgggctgcgctttatcggcccagatgtatatggcagaatcgtcgctcaggataaagaa
gtcaccaaacgacttgcatccgattgcggcatcatcacgccagcgtggcgcatcgtgcgc
agcgtcgaggatctaagatatatcagtggtctgcgcttacccgtagtgattaagccttta
atggaggggagctctataggcattgcccaacgtaatcgcgttgtcgatgtggccgacgta
ctgccgttggcaaaggaattactcgagactttcaatcagccggttctgatcgaagaattt
gtagccgggcgtgaggttgcatattctaaaattcaacatgcaggtgcagaatcctgggct
ttcagtgaagttgtcattgaaggcaatgacgactattttacaaaccacctattcgacgcc
gatgaaaaattgataccaacagtcgggcgcacaattcgcaatatcgatcatgaacttcat
gccaatgaccgcgcggctattgatacctttctaacaatgtttggtgcatatggttattgt
cgcgtcgatgggcgcttggctgacggaaacttccattttcttgagttgactccagatgcg
tggatagctccccgcggacaattcgcgcgaggattcacggaaaaggggtggagctacgcc
gaagttattgcagcggttcttgcttcagtagactaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GCA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system