KEGG   Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2395
Entry
GDI2395           CDS       T00631                                 
Symbol
holA
Name
(GenBank) putative DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
gdi  Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi03030  DNA replication
gdi03430  Mismatch repair
gdi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gdi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GDI2395 (holA)
   03430 Mismatch repair
    GDI2395 (holA)
   03440 Homologous recombination
    GDI2395 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gdi03032]
    GDI2395 (holA)
   03400 DNA repair and recombination proteins [BR:gdi03400]
    GDI2395 (holA)
Enzymes [BR:gdi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GDI2395 (holA)
DNA replication proteins [BR:gdi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GDI2395 (holA)
DNA repair and recombination proteins [BR:gdi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GDI2395 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_gamma3
Other DBs
NCBI-ProteinID: CAP56338
RhizoBase: GDI2395
UniProt: A9HMR0
Position
2473123..2474136
AA seq 337 aa
MKIDARSVARILREPGALRVILLHGDDSGLIRERARLAATAIAPNLDDPFRVAVLDRDAA
DRLDEEIFALSLAGGRRVVWVRDGGDSLTAPLKASLARPSDTLVIVEAPGLASRARLRAL
AEAQADCAAIACYPEEGRALEASIRQMLAEEDIRIDPDALSWFAGLLGPNRAATRGEVEK
LALYAGRGGQLSLDDVRMCIGDAAGVSLEDAAFAATAGDRAGADIAIERALAEGTSPIAV
ARSLLSHLHRLRRARIAMDGGQSRADAMRGLRPPVFFKRTDAFGQALSLWTAARLMEAAE
QTQRLELECKQTGAPDLALCRRHIARLAATAMAGRRR
NT seq 1014 nt   +upstreamnt  +downstreamnt
gtgaagatcgacgcgcgctcggtcgcccgcatcctgcgtgaacccggggcgctgcgcgtc
atcctgctgcacggcgacgattccggcctgatccgcgaacgcgcccgtctggccgcgacc
gccatcgccccgaacctggacgacccgttccgcgtcgccgtgctggaccgcgacgcggcg
gaccggctggacgaggagatcttcgcgctatcccttgccggcggccgccgcgtcgtctgg
gtccgcgacggcggggacagcctgacggccccgctgaaggccagcctggcccggccatcg
gatacgctggtgatcgtcgaggccccgggcctggcctcgcgcgcgcgcctgcgcgcgctg
gccgaggcgcaggccgattgcgccgccatcgcctgctaccccgaggaaggccgcgcgctg
gaagcctcgatccgccagatgctggcggaagaggacattcgcatcgatcccgacgccctg
tcctggttcgccggcctgctgggaccgaaccgggccgcgacacgaggcgaggtcgagaag
ctcgccctctatgccgggcggggcggccagctctcgctggacgacgtgcggatgtgcatc
ggggacgcggcgggcgtgtcgctggaagacgcggccttcgccgcgacagcgggcgaccgg
gccggcgcggatatcgcgatcgagcgcgcgctggccgagggcaccagcccgatcgcggtc
gcccggtcgctgctgtcgcacctgcaccggctgcggcgcgcgcgaatcgccatggatggc
ggccagagccgcgccgacgccatgcgcggcctgcgcccgcccgtcttcttcaagcggacc
gatgccttcggccaggccctttccctgtggacggccgcccgcctgatggaggccgccgaa
cagacccagcgcctggaactggagtgcaagcagaccggcgccccggacctcgcgctctgc
cgccgccatatcgcgcgcctggccgcgaccgcgatggcggggcgccgccggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (26)   

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