| Entry |
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| Definition |
ribonuclease R (EC:3.1.13.1)
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| Orthology |
| ribonuclease R [EC:3.1.-.-] |
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| Organism |
gdj Gluconacetobacter diazotrophicus PAl 5 (JGI)
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| Pathway |
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| Class |
Genetic Information Processing; Folding, sorting and degradation; RNA degradation [PATH: gdj03018]
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| SSDB |
    |
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| Motif |
 |
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| Other DBs |
NCBI-GI: NCBI-GeneID: JGI: UniProt: |
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| Position |
1833564..1835909
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| AA seq |
781 aa  
MGGRNPSDPQPTACPSPDVPPTDPRPPAPPQPGGGLPDREALRRFVTEASGRVGKREIAR
AFNLGPEHKAALRAMLRELALEGTLVPAGARRFRASAAMPEAALVQVTGTDPDGDPIARP
VVWDGDGPAPVVFMHPEQKGRPALAPGERVVARLKRLGPGRYEGRTLRRLTDAPGRIVGV
FRPTTLYDGPGPLAPPRRHAEAGRLVPADRRAKAEWIIPAGETMGAEAEEVVVAEPLPLA
GSGLKPARIVARLGPMGDARSVSLLAIHTHSIPDQFPAEALSEAERARGVSPEGREDLRD
VPLITIDGEDARDFDDAVYAEPDGDGFRLIVAIADVAHYVRPGSALDREARRRGNSVYFP
DRVVPMLPEALSNGWCSLRPGEDRGCLFAEIFIDAAGNKTRHRFGRGIMRSAARLTYDQA
QAIVGNVEESQQETGLPDGLINTLFTAWRALSTARARRGTLDLDVPERVVRLDTSGRITA
IEPRPRHDSHRLIEEFMVLANVAAAEELERRRRPCLYRIHAPPSPERAEAMRDSLSAMGF
DLPPPGALRARDLGAVLARAAQGEASGPASGTPVSGTLVSETILRAQSQAEYSPDNIGHF
GLALPAYAHFTSPIRRYADLLVHRALIGMGTQPADGMPAADAACLDEIGEQVSTAERRAA
LAERETTERYVAAWLADRVGAEFSGHVSGVTRFGAFVTLTQTGATGLVPVSTLPDDVWTH
DEKTQTLRGRHGGLALRLGQPVTVRLVEATPVTGGLLFALVGANPAAASGPARRARGTRP
R |
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| NT seq |
2346 nt  +upstreamnt +downstreamnt
atggggggacggaacccgtccgaccctcagccgaccgcctgcccgtcgcccgacgttccg
ccgaccgatccgcgccccccggccccgccgcagccgggcgggggcctgccggaccgcgag
gcgctgcgccggttcgtcaccgaggccagcggccgtgtcggcaagcgcgagatcgcgcgc
gccttcaacctgggtcccgagcacaaggcggcgctgcgcgccatgctgcgcgaactggcg
ctggagggcacgctggtcccggccggcgccaggcgcttccgcgcgtccgccgccatgccc
gaggccgcgttggtgcaggtgacgggcaccgacccggacggcgacccgatcgcccgcccc
gtggtgtgggatggcgacggcccggcgccggtcgtcttcatgcatcccgagcagaagggc
cgccccgcgctggcgcccggcgagcgggtggtggcgcggctgaagcgactcggccccggc
cggtacgaaggccgcaccctgcgccgcctgaccgatgcgccgggccgcatcgtgggcgtg
ttccgcccgacgaccctgtatgacggccctgggccgctagccccgccccgccggcacgcc
gaggccgggcgcctggttccggccgaccgccgggcgaaggcggaatggatcatccccgcg
ggcgagacgatgggcgccgaggccgaggaggtcgtcgtggccgagccgctgccgctggcg
gggtccggcctgaaacccgcgcggatcgtggcccggctgggcccgatgggcgatgcgcgg
tcggtcagcctgctggcgatccacacccattcgattcccgaccagttccccgccgaggcg
ctgtccgaagcggaacgggcgcgcggcgtgtcgcccgagggtcgcgaggatctgcgcgac
gtgccgctgatcaccatcgacggggaggatgcccgggatttcgacgacgcggtctatgcc
gagccggacggcgacggattccgcctgatcgtcgccattgcggacgtggcgcattacgtc
cgccccggatcggccctggaccgcgaggcgcggcggcggggcaattcggtctatttcccc
gaccgggtggtgccgatgctgcccgaggcgctgtcgaacggatggtgctcgctgcgcccg
ggcgaggatcggggctgcctgttcgccgagatcttcatcgacgcggcggggaacaagacc
cgccaccgcttcggccgcggcatcatgcgcagcgccgcgcgcctgacctacgaccaggcc
caggcgatcgtcggaaacgtggaggagagccagcaggaaaccggcctgccggacgggctg
atcaacacattgtttacggcgtggcgcgcactgtcgacggcgcgcgcgcggcgtggcacg
ctggatctcgatgtgccggagcgcgtggtgcgactcgacacgtccgggcggatcaccgcc
atcgaaccccgcccccgtcacgacagccatcgcctgatcgaggaattcatggtgctggcc
aatgttgccgccgccgaggaactggaacgaaggcgccggccctgcctgtatcgtatccac
gcgccgccttcgcccgaacgggccgaggcgatgcgcgacagcctgtcggccatggggttc
gacctgccgccgcccggggcgctgcgcgcgcgcgacctgggcgcggtgctggcgcgcgcc
gcgcagggcgaggcatccggccccgccagcggcacgcccgtcagcggaaccctggtcagc
gagacgatcctgcgggcgcagagccaggccgaatacagccccgacaatatcggccatttc
ggcctggcgctgccggcctatgcccatttcaccagcccgatccgccgctatgccgacctg
ctggtgcatcgcgccctgatcgggatgggcacgcagccggccgacggcatgccggccgcc
gacgccgcatgcctggacgagatcggcgagcaggtcagcaccgccgagcgccgcgccgcg
ctggccgagcgcgagacgacggaacgctatgtcgccgcatggctggcggaccgggtcggg
gcggaattttccggccatgtgtcgggcgtaacccggttcggcgcgttcgtgacattgacg
cagaccggcgccaccggtctggtaccggtatcgaccctgcccgacgatgtctggacgcat
gacgaaaagacccaaaccctgcgtggccgccacggtggactggccttgcggctgggccag
ccggtcacggtacggctggtcgaggcgacaccggtgaccggcgggctgctgttcgccctg
gtgggcgcgaatccagcggcggcgtccggcccggcgcgccgcgcgcgtggcacgcgccca
cgctga |
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