KEGG   Gluconacetobacter diazotrophicus PAl 5 (JGI): Gdia_3550Help
Entry
Gdia_3550         CDS       T00798                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gdj  Gluconacetobacter diazotrophicus PAl 5 (JGI)
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gdj00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Gdia_3550
Enzymes [BR:gdj01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Gdia_3550
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Gdia_3550
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
3885807..3886667
Genome map
AA seq 286 aa AA seqDB search
MPELPEVETVMRGMRLHLDGKTIARVAVRRADLRFPFPADLVARLEGATITGFARRAKYI
LIRLDTGDTLLLHLGMSGRVLLSLPGDAPVPDRHEHFFFETTDGTRCGLIDPRRFGAVDL
MPTAEERAHRLLARLGPEPLGNQFSQHWLQEVLARRRTSIKAALLDQTVVAGLGNIYVSE
ALFRAGIHPARLACTLDAAEDARLVQAIRAVLREAIAAGGSSLRDYVQPDGELGYFQHAW
RVYGRAGQGCPDCPGPPACHGVERLEQAGRSSFFCPLCQPPPGKVS
NT seq 861 nt NT seq  +upstreamnt  +downstreamnt
atgccggaactccctgaagtcgaaacagtgatgcgcgggatgcgattgcatctcgacggg
aagacgatcgcgcgggtcgcggtgcgtcgcgccgacctgcgtttcccctttcccgcggac
ctggtggcccggctggagggcgccacgatcaccggtttcgcccgacgggcgaaatatatc
ctgatccggctggatacgggcgataccctgctgctgcacctgggcatgtcggggcgggtc
ctgctgtcattgcccggcgacgcccccgtgcccgaccggcacgagcatttcttcttcgag
accacggacgggacgcggtgcggcctgatcgaccccaggcgcttcggcgcggtcgacctg
atgccgacggcggaggagcgagcacatcggctgctggcccgactcggtcccgaaccgctg
ggcaaccagttctcgcaacactggctgcaggaagtactggcccggcggcggacctccatc
aaggcggcgctgctggaccagacggtggtggcgggcctgggcaatatctatgtgtccgag
gcgctgttccgcgccggcatccatccggcacgcctggcctgcaccctggacgcggccgag
gacgcgcgcctggtccaggcgatccgcgccgtgctgcgcgaagcgatcgcagcgggcggg
tccagcctgcgcgactatgtccagccggatggggaactgggttatttccagcacgcgtgg
cgtgtctacggccgtgcggggcagggatgcccggattgtcccggtccccccgcatgccat
ggtgtggagcggctggaacaggccggacgctccagcttcttctgccccctgtgccagccc
ccgccgggcaaggtctcgtga

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