KEGG   Geobacter sp. M18: GM18_0714Help
Entry
GM18_0714         CDS       T01421                                 

Definition
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
geb  Geobacter sp. M18
Pathway
Base excision repair
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:geb03410]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
874105..874890
Genome map
AA seq 261 aa AA seqDB search
MPELPDLTVYAENLGKALTGKKVDRVEYHQRGKLNVSAAELSRALAGAEVTGVQRGGKQV
AFHFGNGALLRVHLMLTGGFVLTSPSALDRLQHPVLTVAFSDGSALALTDEKGWASVALN
PGEEKDAPDALALSAEQLQQLCQRKPRTLIKPLLLDQALIGGIGNAYADEILWAARISPK
SPAGKLPPEAVKALADAIPAVLKDAITELRKRHPDMVSGEYREFLKVHRPELKVSPTGAK
IIKENVQSKRTYYTDEQRLYQ
NT seq 786 nt NT seq  +upstreamnt  +downstreamnt
atgccagagctcccggacctgactgtgtacgcagaaaatctgggcaaggcgttgaccggc
aagaaggtcgacagggtggagtatcaccagaggggaaagctgaacgtttctgcggcagaa
ctctcccgggcgctcgccggcgccgaggtgaccggcgtgcagaggggtgggaaacaggtc
gcctttcacttcggcaacggggcgttgctgcgggtgcatctgatgctgaccggcggcttc
gtcttgaccagcccatcggctctcgaccggctgcagcacccggtgctgactgtcgccttc
agcgacgggagcgcgcttgcgttgaccgatgaaaaggggtgggcgagcgtagccctcaat
cccggcgaggaaaaggacgcgcccgacgccctggccctcagcgccgaacaactgcagcag
ctctgccagaggaagccccggacgctcatcaagccgctgctgctcgatcaggcactgata
ggcggcatcggcaacgcctacgccgatgaaatcctctgggccgcgcgcatctcccccaag
tcgccggcgggcaaacttccccccgaagcggtaaaggccctggccgacgccatccccgcg
gtgctcaaggacgccatcaccgagctgaggaagaggcacccggacatggtatcgggggaa
taccgcgaattcctgaaggtgcaccgaccggaactgaaggtgtcgcccaccggagcgaag
atcatcaaagagaacgtccagtccaagcgcacctactacaccgacgagcagcggctgtac
cagtaa

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