KEGG T01421: GM18

Geobacter sp. M18: GM18_3400

Entry

GM18_3400 CDS T01421

Definition

tryptophan synthase subunit beta

Orthology

K01696

tryptophan synthase beta chain [EC:4.2.1.20]

Organism

geb Geobacter sp. M18

Pathway

geb00260	Glycine, serine and threonine metabolism
geb00400	Phenylalanine, tyrosine and tryptophan biosynthesis
geb01100	Metabolic pathways
geb01110	Biosynthesis of secondary metabolites
geb01230	Biosynthesis of amino acids

Module

geb_M00023

Tryptophan biosynthesis, chorismate => tryptophan

Class

Metabolism; Amino acid metabolism; Glycine, serine and threonine metabolism [PATH:geb00260]
Metabolism; Amino acid metabolism; Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:geb00400]

SSDB

Motif

Pfam:

PALP

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(3971151..3972341)

AA seq 396 aa
MDTPDHSGHFGRFGGRYVSETLMPALLELEKAYNHFRNEKGFQEEYAYYLRQYVGRPNPL
YFAEKLTGKCGGAKIYLKREDLNHTGAHKVNNTIGQALLAKRMGKKKVIAETGAGQHGVA
TATVAALFGMECEVFMGVEDIRRQSLNVFRMKLLGAKVTPVSSGTATLKDAMNEAMRQWV
TYVEDTFYIIGTVAGPHPYPAMVRDFQVIIGQEARAQHLEAEGRLPDYLVAAVGGGSNAI
GLFHPFIDDASVRMIGVEAAGYGIDTGKHAAPLTAGSVGVLHGNKTYLLQDEYGQIAHAH
SISAGLDYPGVGPEHSFLKEIGRASYVSVTDDEALEAFQVLTREEGIIPALESSHAVAHA
LRLAPTLSANESIVVCLSGRGDKDIHTVADVMGVQL

NT seq 1191 nt +upstreamnt +downstreamnt
ttggacacgcctgaccacagtggacacttcggccgtttcggcggcagatacgtctcagaa
acgctcatgccggcgctgctcgaactcgagaaagcttacaaccattttcgcaacgaaaag
gggttccaggaggagtacgcctactacctgcgccagtacgtcgggcgccccaacccgctc
tatttcgccgagaaactgaccggcaagtgcggtggggcgaagatatacctgaagcgcgag
gacctgaaccacaccggcgcgcacaaggtgaacaacaccatcggccaggcgcttttggcc
aagcggatggggaagaagaaggtcatcgccgagaccggcgccgggcagcacggcgtggcg
acggccaccgtcgcggcgctgttcggcatggagtgcgaggtcttcatgggtgtggaggac
atccgccgccagtcgctgaacgtgttccggatgaagcttctgggggccaaggtgacgccg
gtcagctccggcaccgccaccctgaaggacgccatgaacgaggcgatgcgccagtgggtg
acctacgtggaggacaccttctacatcatcggtaccgtggcggggccccatccctacccg
gccatggtgcgcgacttccaggtcatcatcggccaggaggcgagggcgcagcaccttgaa
gccgaagggaggctcccggattacctggtcgccgcggtaggcggcggcagcaacgccata
ggcctgttccaccccttcatcgacgacgcctccgtccggatgatcggcgtcgaggcggca
ggctacggcatcgacaccggcaagcacgcggctccgcttaccgcggggagcgtcggtgtt
ttgcacggcaacaaaacctacctgctgcaggacgagtacggacagatagcccatgcccat
tccatttcggccggattggactacccgggtgtcggtccggagcactcgttcctcaaggag
atcgggcgggccagctacgtctcagtcaccgacgacgaggcgctggaggcattccaggtg
ctgacccgcgaggaggggatcatccccgcactggagtcttcgcatgcagtggcccatgca
ctgcgtctggctccgacactttctgccaatgagagcatcgtcgtctgtctgtcgggcagg
ggcgataaggacatccataccgtggccgatgttatgggggtgcagctttaa

All links

Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GEB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

Download RDF

DBGET integrated database retrieval system