KEGG T01421: GM18

Geobacter sp. M18: GM18_3647

Entry

GM18_3647 CDS T01421

Definition

2-oxoglutarate dehydrogenase, E1 subunit (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

geb Geobacter sp. M18

Pathway

geb00020	Citrate cycle (TCA cycle)
geb00310	Lysine degradation
geb00380	Tryptophan metabolism
geb01100	Metabolic pathways
geb01110	Biosynthesis of secondary metabolites
geb01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:geb00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:geb00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:geb00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4269286..4271979)

AA seq 897 aa
MGILNNLSPQWIESQYELWKREPEQLSEAWRTFFTGFDLGAARPAPGPALLPGSEEALKQ
SAVQSLIYRYRDIGHLLACTDPLSPCLIEHPLLSLPAFGLEPTDLDKTFHTRRFMRRSAT
LKEILQVLRSTYCGSVGVEFMHLQDPEERQWLIDRMEPGGNRGFFTPEKRLLLLKKLKEA
ALFERELHKKFPGQTRFSLEGGDVLIPLLDAAVAKAASLGVTDVVFGMPHRGRLNVLCNL
FGMPYENMFAEFADNVEYGVVGEGDVKYHKGFSVDLPVSGGGSVHLTLTSNPSHLEAIDP
VVEGKCRARQDRIGTEGETRVLPLLIHGDAAFSGQGVVAETLNLSQLAGYRTGGTLHIVL
NNQIGFTTSAADARSSHYATDAAKMVQAPVFHVYGDDPEAVVHVTELAVSYRDRYRKDVV
VEVICYRRHGHNEGDEPYFTQPLMYQQIKLRPQLHSLYELELLAEGVAEEELKVIENEVV
QRLTQAGERAAAPAESAFLARWSGMKPGVSKVAVPTAVASATLLELSEQLARVPEGFNPH
PKVAAVLQKRRDAVIKGGPLDWGNVETLAYATLLSGGLSVRLSGQDVRRGTFSHRHAALF
DQVTGDTYLPLCSVLDKGARFCAFDSMLAEFSVLGFEYGYSLEAPEALTIWEAQYGDFAN
GAQVIIDQFLVSGEAKWERSSGLVLMLPHGYEGQGAEHSSARIERFLELAAAGNIQVVYP
TTPAQLFHVLRRQMLQPFRKPLILFTPKSLLRHPDCVSRLEELSSGSFREVIAEPAVGEA
MRQVLICSGKIYYDLLGRIRKDQLQGHALVRIEQLYPLPTEQLRDELQRYPSGTRFAWVQ
EEPRNMGAWRFIHEPLSELLGTVPRYVGRPDAAAPASGSHRLDRVEQERIIDEALKT

NT seq 2694 nt +upstreamnt +downstreamnt
atgggtatattgaataacctaagccctcaatggatcgagagccagtacgagctgtggaag
cgggagccggagcagctttccgaggcttggcgcacattcttcaccggcttcgacctgggg
gctgcacgccctgcacccggcccggcgctcctgccggggtccgaagaggcgctgaagcag
tccgcggtccagtcgctcatttaccgttaccgggacatcggccacctgctggcctgtacc
gatcccctttccccctgcctgatcgaacaccccctgctctccctcccggccttcgggctg
gagccgaccgacctcgataagaccttccataccagacgtttcatgaggagaagtgcaacg
ctgaaggagatcctgcaggtgctgcgcagcacctactgtggttcggtcggtgtcgagttc
atgcatctgcaggacccggaggagcgccagtggctcatcgaccggatggagccgggcggc
aaccgcggcttcttcacgcctgaaaagcggctcctgcttctgaagaagctgaaggaggcg
gcccttttcgagcgtgaactgcacaagaagttcccgggccagaccaggttttcgcttgag
gggggggatgtcctgatcccgcttctggacgccgccgtagccaaggccgcctcgctgggg
gtcaccgacgtagtgttcgggatgccgcaccgcgggcgccttaacgttctgtgcaacctc
ttcggcatgccctacgagaacatgttcgccgagttcgccgacaacgtggaatacggtgtg
gtaggcgaaggggatgtgaagtaccacaaaggtttctccgtggaccttccggtctccggg
gggggaagcgtgcacctcaccctcacctccaacccgagccacctggaggcgatcgacccg
gttgtggagggtaaatgccgggcgcgccaggaccggatcggaaccgagggcgagacaagg
gtgctgccgcttctgatccacggcgacgccgccttctccggccagggggtggttgccgag
accctgaacctctcccagctggctggctaccgcaccggcggaacgctgcacatcgtgctc
aacaaccagatcggtttcaccaccagcgcagccgatgcccggtccagccactacgccacc
gatgcagcgaagatggtgcaggcgccggtgttccacgtctacggcgacgaccccgaggcg
gtggtgcacgtcaccgaactggcggtgagctaccgcgatcgctaccgtaaggacgtggtg
gtcgaggtgatctgctaccgcaggcacgggcacaacgaaggggacgagccgtacttcacc
cagccgctcatgtaccagcagatcaagctccgcccgcagctgcactctctgtacgagctg
gagcttctggcagagggggtagccgaggaggagctgaaggttatcgagaacgaggtggtg
cagcgcctgacccaggcaggggagcgcgccgcggccccggccgagtcggcctttctggcg
cgctggagcggcatgaagcccggtgtctcaaaggtagcggtgccgaccgcggtggcctcc
gccacgcttctggagctctcggagcaactggcccgtgtcccggaagggttcaacccgcac
ccgaaggtggccgcagtgctccagaagcgccgcgacgcggtgatcaaggggggaccgctg
gactggggtaacgtggagacgctggcctacgccacgctcctctccggcggcctttcggtc
cggctttccggacaggacgtccggcgcggtaccttcagtcaccgccatgccgccctcttc
gatcaggtcaccggcgatacctacctgccgctttgcagcgtgctggacaagggggcgcgt
ttctgcgcctttgacagcatgctggccgagttctccgtgctcggcttcgagtacggctat
tctctcgaagcacccgaggcgctcaccatctgggaggcccagtatggcgacttcgccaac
ggggcccaggtgatcatcgaccagttcctggtgagcggcgaggcgaagtgggagcgctcc
agcggcttggtgctcatgctgccgcacggctacgaggggcagggggcggaacattccagc
gcccgcatcgagcgcttcctggagctcgccgccgcggggaacatacaggtggtctacccg
acgactccggcccagctcttccacgtgttgcgccggcagatgctgcagcccttcagaaag
ccgctgatccttttcaccccgaagagtctgctgcggcaccccgactgtgtctcgaggttg
gaggaactgagctccgggagtttccgggaggtgattgccgagccggccgtgggcgaagcg
atgcgccaggtgctgatctgcagcggcaagatctactacgatcttctggggcgaatcagg
aaggaccagttgcaggggcatgccctggtcaggatcgagcagctctaccccctcccgaca
gagcagttgcgggacgagttgcagcgctacccgtccggtacccgtttcgcctgggttcag
gaggagccgcgcaatatgggggcatggcgcttcattcacgagcctctcagcgagcttttg
gggacggttcccaggtacgtcgggcgtcccgacgccgcggcgccagcctccggctcgcac
cgtctggaccgggtggagcaggagcgcatcatcgacgaggcgttaaaaacctga

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GEB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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