KEGG   Geobacter sp. M18: GM18_3879
Entry
GM18_3879         CDS       T01421                                 
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K14162  error-prone DNA polymerase [EC:2.7.7.7]
Organism
geb  Geobacter sp. M18
Brite
KEGG Orthology (KO) [BR:geb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:geb03400]
    GM18_3879
Enzymes [BR:geb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GM18_3879
DNA repair and recombination proteins [BR:geb03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    GM18_3879
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HHH_3 T2SSK DUF5330 DUF655
Other DBs
NCBI-ProteinID: ADW15301
UniProt: E8WRT6
Position
4533002..4536100
AA seq 1032 aa
MFVHLHVHSSLSPNWGVHSPEALCSEAARLGFDTLAITDRNGLYGVPRFLDAAREAGISP
IIGTEAVTEQNRAVLLAVDREGYANISRLLSDLHCSKNFDLIQALAQYRRGVIVLSDDRR
LLSVLKRESDQGLFVELSPGHDMHRALALSRDLRIPPVATARALMLDRSALTPPLSRRER
GDVDTPRQEREYVDAHLRRDKDVLDDFHLHRVLRAIHLNTKLSRLAPELTACESDLLYPP
LRMSDFFPHCPEALENTRRIAGMCRGEWDFSSTIFPAFRGLGNDDAFATLSARARAGALW
RYGSIDAKVEARLEKELTIIRDKGFAHYFLVVEEITKQSQRTCGRGSAAASLVAYCLGIT
HVDPIRHNLFFERFLNEGRSDPPDIDVDFPWDERDAILDFAFARYGARRAAMVANQVGFK
GRSALREVAKVYGLPDFEIKEMTDRISGFWHAEQSAAAMAGHPLFRGEALSRDWQEILAT
ARRLNGQLRHLSLHCGGLVIVPDEIRRYVPVEISHKGLPLIQWEKDQTEDAGLVKIDILG
NRSLAVIRDALAAVKEQKGMEIDYASWRPLEDERTQSLMRRGLTIGCFYLESPSVRLLLR
KIWSSTAPPETFDSDLFEVLVQASSIIRPAANSFIQEYVARMQGKKWSHLHPLLESVLGE
TLGIAIYQEQITQIAMELAGFSASEGDQLRKVITKKHREKRLADFHAKFIAGGKERGVPG
EVLDSIWEQILSFAGYSFCKPHSASYALLSAKAAYMKANHPAQFMAAVISNQGGYYSPFA
YISEGRRLGLTILPPDINESDYHYKGFEKSLRVGLMQIDGLTREGAKRLLKERKERGPFG
SFQDFLRRAGVQRADAERLVKAGCFDPLEGEQRRPALLWELLHFQQQATALLFEQQTELP
QAPPYDAETVLRQEVETLGFLVSRHPLALYKAQWQRHRPIKAAELIRHSGKWVTMVGWWI
TTKTVEDKHGRPMEFISFEDVTAIFDATFFPDVYARFCRKLSQRRPYLLKGVVEEEFGVA
TLRVKWVGFLDG
NT seq 3099 nt   +upstreamnt  +downstreamnt
atgttcgttcatcttcacgtacattcctcgctctccccaaactggggggtgcactcgccg
gaggcgctttgctcggaggccgcacgtcttggctttgacacgctggccatcaccgaccga
aacggcctctacggcgtgccgcgcttcctggacgctgcacgtgaagccgggatctcgccc
atcatcggcacggaggcggtgacggaacaaaaccgcgcggtgctcttggcggtcgaccgg
gagggctacgccaacatctcccgccttctctcggatctccactgttcgaagaatttcgat
ctgatccaggcgctcgcccaataccggcgcggggtgatagtgctgagcgacgaccggcgg
ctgctgtcggtgctcaagcgggaatcggaccaggggctcttcgtggaactgtcgccgggg
catgacatgcaccgggcactggcgctctcgcgggatctgagaattccgccggtggctacg
gcacgggccttgatgctggacagaagcgccctcaccccgcccctctcccggagggagagg
ggggacgtggacacaccccgtcaggagagggagtatgtggacgcccacctccgtagggac
aaggatgtgctagacgatttccacctgcatcgggtgctgcgggctattcacctcaacacg
aagttgtcacggctcgccccggagttgacggcttgcgagtcggatctgctctaccctccc
ctgaggatgtcggacttcttcccgcactgcccggaggcgctggaaaacacgcggcggatc
gccgggatgtgccgcggggagtgggacttctccagcaccatcttcccggccttccgcggc
ctgggcaacgacgacgccttcgcaacgctctcagcgcgcgcccgtgcaggagccctctgg
cgctacggctcgatcgacgcgaaggtggaggcgcgcctggagaaggaactcaccatcatc
cgcgacaagggattcgcccactacttcctggtggttgaggagatcaccaagcagtcgcaa
cgcacctgcggccgcggcagcgcggcggcttctctcgtcgcctactgcctcggcatcacc
cacgtcgatcccatccggcacaacctcttcttcgagcgtttcctgaacgaggggcgcagc
gacccgcccgacatcgacgtggacttcccatgggacgagcgcgacgcgatcctcgacttc
gccttcgcccgctacggcgcgcggcgtgcggcgatggtggcgaaccaggtgggcttcaag
gggaggtcggcactgcgcgaggtggccaaggtctacggcctcccggatttcgagatcaag
gagatgacggaccggatctccggtttctggcacgcggaacagagtgcggcggcaatggcg
gggcatcccctgttccggggggaggcgctctcccgggactggcaggagatcctcgccacc
gcacggcgcttaaacggccagttgcgccacctttcgctgcactgcggcgggctcgtgatc
gtgccggacgagatccgcaggtacgtcccggtggagatctcgcacaaggggctgccgctg
atccagtgggagaaggaccagaccgaggacgctgggctggtgaagatcgacatcctggga
aaccggtcgctggctgtgatccgcgacgcgctcgccgcggtgaaggagcaaaaggggatg
gagatcgattacgcgagctggcggccgcttgaggacgagaggacgcagagcctgatgcgc
cgcggcctcaccatcggctgcttctacctggaatccccctcggtgcgccttctcttgaga
aagatctggagttccaccgcgccgccggagaccttcgacagcgacctcttcgaggtgctg
gtgcaggcctcctccatcatccggcccgcggccaacagcttcatacaggagtacgtggcc
aggatgcaggggaagaaatggtcgcacctgcacccgcttctggaaagcgtgctgggcgag
acgctcgggatcgccatctaccaggagcagatcacccagatcgccatggaactcgcgggc
ttctcggcgagcgagggggaccagctccgaaaggtgatcaccaagaagcaccgggagaaa
aggctcgcggacttccatgccaagttcatcgcgggggggaaggagcgcggcgttccgggg
gaggtcctggactcgatctgggagcagatcctctcgtttgccggctattccttctgcaag
ccgcactcggcgagctacgccctcttgagcgcgaaggcggcctacatgaaggcgaaccac
ccggcgcagttcatggcggcggtgatctccaaccagggtggctactactcccccttcgcc
tacatctccgaggggcgcaggctcgggctcaccattctgccgccggacatcaacgagagc
gactaccactacaagggcttcgagaagtcgctgcgggtcgggctgatgcagatcgacggg
ctgacccgggagggggcaaagcggcttctgaaggagcgcaaggagcgcgggccgttcggc
tcgttccaggatttcctgcggcgggccggggtgcagcgcgccgatgcggagcgcctggtg
aaggcgggatgcttcgatcctctggagggggaacagaggcgccccgcgcttttgtgggag
ctgctccatttccagcagcaggcgacggcgcttctcttcgagcagcagacggaactccct
caggcgcccccctacgacgcggagactgtgctgaggcaggaggtggagaccctgggtttt
ttggtgtcgcggcacccgctcgccctttacaaggcgcagtggcagcggcacagaccgatc
aaggctgccgaactcatcaggcattcgggcaaatgggtcaccatggtggggtggtggatc
acgaccaagacggtggaggacaagcacggccgtcccatggagttcatctctttcgaggat
gtgacggccatcttcgatgccacctttttccccgacgtgtacgcacggttttgccgcaag
ctctcgcagcggcgcccctatctgctcaagggggtggtggaggaggagttcggggttgcg
acgctcagggtgaagtgggtcggctttctggatggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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