KEGG T01421: GM18

Geobacter sp. M18: GM18_3884

Entry

GM18_3884 CDS T01421

Definition

D-alanine--D-alanine ligase

Orthology

K01921

D-alanine-D-alanine ligase [EC:6.3.2.4]

Organism

geb Geobacter sp. M18

Pathway

geb00473	D-Alanine metabolism
geb00550	Peptidoglycan biosynthesis
geb01100	Metabolic pathways

Class

Metabolism; Metabolism of other amino acids; D-Alanine metabolism [PATH:geb00473]
Metabolism; Glycan biosynthesis and metabolism; Peptidoglycan biosynthesis [PATH:geb00550]

SSDB

Motif

Pfam:

Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp_3 RimK ATPgrasp_Ter GARS_A TTL

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(4542009..4542926)

AA seq 305 aa
MTVDELKTKKIAVLMGGLSAEREVSLNSGKAVLASLVRQGYQAVGIDVGRDLPQRLAEEQ
VERAFIALHGRFGEDGSVQGLLELMAIPYTGSGVLASALAIDKIAAKTMFAAAGLKLAPY
QVLSRGEELKLANPLPVVVKPSREGSSVGVSIVREPQQMEKALAEAFRYDSEILIEAFID
GKEVQVGILDGRAMGAIEIVPKNEFYDYEAKYTDGGAEHILPARLPEQVYQAVLKEGEKA
HAALGCDCYSRVDFLVNEAGECYLLEVNTLPGMTDLSLLPEIARGSGIDFDQLVQRILLA
ASLKI

NT seq 918 nt +upstreamnt +downstreamnt
atgaccgtagatgagctcaagaccaagaagatcgccgtgctgatgggggggctttccgcc
gagcgcgaggtgtccctcaacagcggcaaggcggtgctcgcctccctggtgcgccagggg
taccaggctgtcgggatcgacgtcgggcgcgacctgccccagcggctggcagaggagcag
gtggagcgtgccttcatcgccctgcacggccgcttcggcgaggacggctccgtccagggg
ctcctcgagctgatggcgatcccctacaccggctccggtgtcctcgcctcggccctcgcc
atcgacaagatcgccgccaagacgatgttcgccgccgcaggactgaagctcgccccctac
caggtgctctcccgcggcgaggagctgaagctcgcaaacccgctccccgtggtggtgaag
ccgtccagggaaggctcctcggtaggcgtcagcatcgtgcgcgagccgcagcagatggag
aaggcgctcgcggaggccttccgctacgactccgagatcctcatcgaggcgttcatcgac
ggcaaagaggtgcaggtcggcattctggacgggcgcgccatgggcgccatcgagatcgta
cccaagaacgagttctacgactacgaggccaagtacaccgacggtggtgccgagcacatc
ctcccggcccgtctgccggaacaggtgtaccaggcagtcctcaaggaaggggagaaggcc
catgcggcgcttggctgcgactgctacagccgggtggacttcctggtgaacgaggcaggc
gagtgctacctcctcgaagtgaacaccctgccgggcatgacggacttgagtctgctcccg
gaaatcgcccgcggttcaggcatagactttgatcaactggtgcagcggatacttttggcc
gcatcgctaaaaatctga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GEB (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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