KEGG   Candidatus Gullanella endobia: FVIR_GE00397
Entry
FVIR_GE00397      CDS       T04502                                 
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
ged  Candidatus Gullanella endobia
Pathway
ged03030  DNA replication
ged03430  Mismatch repair
ged03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ged00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FVIR_GE00397 (holC)
   03430 Mismatch repair
    FVIR_GE00397 (holC)
   03440 Homologous recombination
    FVIR_GE00397 (holC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ged03032]
    FVIR_GE00397 (holC)
   03400 DNA repair and recombination proteins [BR:ged03400]
    FVIR_GE00397 (holC)
Enzymes [BR:ged01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FVIR_GE00397 (holC)
DNA replication proteins [BR:ged03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     FVIR_GE00397 (holC)
DNA repair and recombination proteins [BR:ged03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     FVIR_GE00397 (holC)
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: CUX96245
UniProt: A0A143WR71
Position
I:complement(679201..679656)
AA seq 151 aa
MKNVIFYLIEKYDISNGLTTVEQLACNLAADKWRQGKRVLIACEENDQAFKLDEAMWVHD
PNAFVPHNLAGEGPNHGAPIELCWPQCRSNTPRDVLINLLPVYADFVSAFHEIIDFVPNS
NVLKQLARDRYKIYRNFGFQLTTIILPKRGN
NT seq 456 nt   +upstreamnt  +downstreamnt
atgaaaaacgtaattttttatctaattgaaaaatatgatataagtaatggtctaactacc
gttgaacaacttgcttgtaatttagcagctgataaatggcggcaaggaaagcgtgttctt
attgcttgtgaggagaatgatcaagcatttaagctcgatgaagcgatgtgggtgcatgat
cccaatgcttttgtgccacataacttagcaggagaaggtccaaatcatggtgcgccaata
gaactttgctggccacaatgccggagtaacacaccacgggatgtgttgattaatttgcta
ccagtttatgcggattttgtttctgcttttcatgaaataatagattttgtaccaaattca
aatgttttaaaacaactagcgcgcgaccgttataaaatatatcgcaattttggatttcaa
ttaactacaattatattaccaaaacgcggtaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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