KEGG   Candidatus Gullanella endobia: FVIR_GE00452
Entry
FVIR_GE00452      CDS       T04502                                 
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ged  Candidatus Gullanella endobia
Pathway
ged03410  Base excision repair
ged03430  Mismatch repair
ged03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ged00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FVIR_GE00452 (recJ)
   03430 Mismatch repair
    FVIR_GE00452 (recJ)
   03440 Homologous recombination
    FVIR_GE00452 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ged03400]
    FVIR_GE00452 (recJ)
DNA repair and recombination proteins [BR:ged03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FVIR_GE00452 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FVIR_GE00452 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FVIR_GE00452 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: CUX96292
UniProt: A0A143WRD1
Position
I:797177..798943
AA seq 588 aa
MFKKRTVNAIVNIKTKLKRRPIGDVSVLSNSDIPPLLKRLYIQRGICSLSELERGTCGLI
AYYKLSGIEKAVDLLLYALEDQRRIIVVGDFDADGATSTALTVLALQKMGTKKIDFLVPN
RFEDGYGLSPKLVEQAAALGAQIILTVDNGISSHAGVTLAHEKNIIVLITDHHLPSKILP
DADAIVNPNLHDCTFSSKSLAGVGVAFYLMLALRARLNKLNWFSKKGIEAPKLAEFLDLV
ALGTVADMVPLDTNNRILVHQGLSRIRAGFCRPGIRALIEVANRNITQLYASDLGFSLGP
RLNAAGRLDDMSVGVALLLSEDLPKARILALELNALNQTRRKIEKKMEKKALSLCQKIIS
NKQKLPFGLVIYHDQWHQGVVGILASRIKEHFHRPVIAFASMGEGILKGSGRSIAGLHMR
DLLEQLDMLYPGMILKFGGHTMAAGLILEKVQFKQFCQRFSALVTEWLDPSILEGVIWSD
GELSANELSIATAELLRDGGPWGQAFPDPLFDGRFTILSQRLVRKKHLRLLLEPEVGGPI
LDGIAFNIDLQFWPDNSIHTVELAYKLEINEFRGNRSLQLLIQNIWPL
NT seq 1767 nt   +upstreamnt  +downstreamnt
ttgtttaaaaaacggacggttaatgctatagtgaatataaaaacgaaattaaaacggcgt
cctataggcgatgtttctgttctttccaattcagatattccaccattactaaaacgattg
tatatacaacgtggcatttgttctcttagtgagttagaaagaggtacgtgtggattaata
gcttattataaattaagtggtattgaaaaagcagtagatttgcttctatatgctttagaa
gatcagcgtagaataatagtagttggtgactttgatgcggacggagcaaccagtacagcg
cttacagtattagctttacagaaaatgggtacaaaaaaaatagatttcctagtgccaaat
cgttttgaagatggatacggtcttagcccaaagttagtagagcaggcagcagcgctaggt
gcacagattatcctgactgtggataacggtatttcttctcatgctggtgttactctagca
catgaaaaaaatatcatagtacttatcactgatcatcatctccctagcaagattttacct
gacgccgatgccattgttaatcctaatttacacgattgcactttttcgtcaaaatctctt
gctggtgttggtgttgctttttatctgatgttggcgcttcgcgcacgtcttaataagctt
aattggttttcgaagaaaggtatagaagctcctaaactagctgaatttctagatctggtt
gccctaggcacagtagcagacatggttcctctagataccaataaccgtattctagtgcat
cagggattaagccgtattcgtgctggtttttgtcgtcccggtattcgtgccttgatagag
gtagccaatcgcaatattactcaactgtatgccagcgatctgggtttttcactaggacca
cgacttaatgctgcaggtaggttagatgatatgtcggttggagttgctctattattaagt
gaagatctaccgaaagcgcgtattttggcattagagcttaacgctcttaatcaaactagg
cgaaaaatcgaaaaaaaaatggaaaaaaaggcgttatcactgtgtcagaagattattagc
aataaacagaaacttccttttggattagttatctaccatgatcaatggcatcaaggagtg
gttggtattctagcatcacgaattaaagaacattttcatagaccggttattgcttttgca
tctatgggtgaaggtatactaaaaggttctgggcgatctatagctggtttacatatgcga
gatctgcttgaacaacttgatatgttatatcccggcatgatactaaaatttggtggccac
acgatggctgctggtttgatattggaaaaagtgcaatttaaacaattttgtcaacgtttt
tctgcattagtaaccgaatggcttgatccttcaatactagaaggagtaatctggtcagat
ggcgaactatcagctaacgagttatctatagctactgctgaactgttacgtgacggtggt
ccttggggacaagcatttccagatccattatttgacggaaggtttactatattaagtcag
cgcttggttagaaaaaaacatcttagacttcttcttgaacccgaggtaggaggtccgata
ttggatggtattgcttttaatattgatttacaattttggccagataatagtattcatacc
gttgagttagcttataagttagagataaacgaatttcgtggtaaccgatccctacaactt
ttaatacagaatatttggccattataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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