KEGG   Geminocystis sp. NIES-3708: GM3708_667
Entry
GM3708_667        CDS       T04168                                 
Name
(GenBank) RNA chaperone Hfq homologue
  KO
K03666  host factor-I protein
Organism
gee  Geminocystis sp. NIES-3708
Pathway
gee02024  Quorum sensing
gee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GM3708_667
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GM3708_667
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gee03019]
    GM3708_667
   03036 Chromosome and associated proteins [BR:gee03036]
    GM3708_667
Messenger RNA biogenesis [BR:gee03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     GM3708_667
Chromosome and associated proteins [BR:gee03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    GM3708_667
SSDB
Motif
Pfam: Hfq Thioredoxin_14 DUF3107
Other DBs
NCBI-ProteinID: BAQ60261
UniProt: A0A0D6ABT2
Position
complement(759010..759219)
AA seq 69 aa
MTVFNTGFPSIRQIQTFIKNKTPVEIGLITNQSEQGLILWQDQNCFCLQNSKKEKILIWT
QSLAYIKSK
NT seq 210 nt   +upstreamnt  +downstreamnt
atgacagtatttaacaccggctttcccagtattagacaaatacaaacctttattaaaaat
aaaacccctgtagaaattggattaataaccaatcaatcagaacaaggattaatattatgg
caagatcaaaattgtttttgtcttcagaatagtaaaaaagagaaaatattgatttggaca
caatcccttgcttatattaaaagtaaataa

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