KEGG   Geitlerinema sp. PCC 7407: GEI7407_0988
Entry
GEI7407_0988      CDS       T02366                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
gei  Geitlerinema sp. PCC 7407
Brite
KEGG Orthology (KO) [BR:gei00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gei03016]
    GEI7407_0988
Enzymes [BR:gei01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     GEI7407_0988
Transfer RNA biogenesis [BR:gei03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    GEI7407_0988
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: AFY65486
UniProt: K9S698
Position
complement(1184391..1185020)
AA seq 209 aa
MALQDFQICDRDLSEDQLEEYLDAEAIALDTETMGLNPHRDRLCLVQLCNPEGQVTVIRI
AQGQTEAPNLRQLLEQEHSLKVMHFARFDVAVLRRQLGIFVKPLYCTKIASKLARTYTPR
HGLKDLIQELEQVELDKSSQSSDWGNAAHLSTDQLRYAANDVRYLISACRKLTVMLQREG
RWELAEQCFGCLPTIVELDLLQYNNIFEH
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcactacaggattttcaaatttgcgatcgcgatctgtccgaggaccagctagaggag
tatctcgacgccgaggcgatcgccctcgacaccgaaaccatgggcctcaacccccaccgc
gatcgcctgtgcctggtccagctgtgcaatccggagggacaggtcaccgtgattcgtatc
gcccagggccaaaccgaagcgcccaacctgcggcagctcctcgagcaagagcatagcctc
aaggtgatgcactttgcccgctttgacgtcgcggtgctgcgccgccagctgggtatcttc
gtgaagccgctgtactgcacgaaaatcgccagtaagcttgcgcgcacctacaccccgcgc
cacggcctcaaggacctcatccaggagttggagcaggtggagctcgataaatcgtcccaa
agttcggactggggcaacgcggcccatctgtcgacggatcagctgcgctacgcagccaac
gatgtgcgctacctgatcagcgcctgccggaagctcaccgtcatgctgcagcgcgaaggc
cgctgggagctcgccgagcagtgctttggctgcttgcccacgatcgtcgagctcgacctg
ttgcagtacaacaatatctttgaacactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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