Entry |
|
Definition |
(GenBank) exodeoxyribonuclease V, alpha subunit
|
KO |
| exodeoxyribonuclease V alpha subunit [EC: 3.1.11.5] |
|
Organism |
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:gem00001]
Genetic Information Processing
Replication and repair
03440 Homologous recombination
GM21_0323
Enzymes [BR:gem01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GM21_0323
DNA repair and recombination proteins [BR:gem03400]
Prokaryotic Type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GM21_0323
 |
SSDB |
    |
Motif |
 |
Other DBs |
NCBI-ProteinID: JGI: UniProt: |
Position |
complement(397554..399353)
 |
AA seq |
599 aa  
MAAETFQLNDIDRQFAAFICRQAASRDAHLEAAAALLSRGVTGGDVCLDLEGALEDARAA
GYRIESVAAWRDRLAAHQVVGTPGEFKPLILDHADRLYLQRYWRYENELAEAIMKRGETV
QFDRTLLQQGLARLFPPTPGEIDWQRVAALAAVTRRFCVISGGPGTGKTSTVVKVLSLLL
EQAEGAGTGAGLRIALTAPTGKAAARLKESISDGARFAEEGVRGLIPEDVFTLHRLLGYL
KGSSGFRHNADNPLPYDVIIVDEASMVSLPLMAKLVCALRRDTRLILLGDRDQLASVEAG
AVLGDICDTGGVHGFSPAFAALTAEVAGDAVASQPGMSPLGDAVVQLRKSYRFSSAGGIG
KVGSLVNAGDAPGALSACLDPAVAGVTLVPLPPASALADALAKRITEGYGGYLREESPEA
AFAQFSRFRILCAMRSGPFGVEAVNLLVRQRLSQAGMIHPRGRWYAGEPVMITRNDYNLG
LFNGDVGLILPDAESGGELRAFFPSGTGGMRKVLPLRLPEYECAFAMTVHKSQGSEFDRV
LLVLPDRDTPVLTRELLYTAITRAKTSVDILANQELFLTTVARRVIRRSGLRDKTWNCN |
NT seq |
1800 nt  +upstreamnt +downstreamnt
atggccgctgaaacattccagctaaacgacatagaccggcagttcgccgccttcatctgc
cggcaggcggcaagccgcgacgcgcaccttgaagctgcggcggcgctcttgagccgcggg
gtgaccgggggggacgtctgcctcgacctggagggcgccctggaagacgcgcgcgccgcc
gggtatcgcatcgaatcggtagccgcctggcgcgaccggctcgccgcccaccaggtggta
ggcactccgggcgaattcaagccgctcatccttgaccacgccgaccgcctctacctgcag
cgctactggcgctatgagaacgagctggccgaggcgatcatgaagcgcggcgaaacggtg
cagttcgaccggacgctgttgcagcaggggctcgcgcggctattccctcccacgccggga
gagatcgactggcagcgggtcgcggccctcgccgccgtcaccagacgcttttgcgtcatc
tccggagggcccggaaccggcaagacctcgaccgtggtaaaggtgctatcgctcctcctg
gagcaggcggagggggccggaaccggcgccggcctaaggatcgcgctgactgcccccacc
ggcaaggcggccgcgaggcttaaggaatcgatcagcgacggagcccggtttgctgaagag
ggggtacgcgggctgatcccggaggacgtcttcaccctgcaccgcctgctcggttacctg
aaggggtccagcggcttccgccacaacgccgacaacccgctcccctacgacgtgataatc
gtcgacgaagcctccatggtctcgctccctctcatggccaagctggtctgcgccttgcgg
cgggacacccgcctgatcctcttgggcgaccgggaccagctcgcctccgtggaagcagga
gccgtcctgggcgacatctgcgacaccggcggcgtgcacggcttctcccccgctttcgcc
gcgctcacagccgaagtcgccggcgacgccgtcgcctcgcaacctggcatgtcccccctc
ggcgacgccgtcgtgcagttgcggaaaagctaccgcttctcctccgccggaggcatcggc
aaggtaggctcgctggtcaacgcgggggacgctcccggggctttgtcggcctgccttgat
ccggccgtagccggcgtcacgctggtgccgctgccgcccgcgtccgccctggccgacgcg
ctcgccaaaaggatcaccgaaggctacggcggctatttgcgggaggagagtcccgaagcg
gccttcgcgcagttcagcaggtttcggatcctttgcgccatgcgcagcggcccgttcgga
gtcgaggcagtcaacctcctggtgcgtcagcggttgtcccaggcggggatgatccacccc
cgcggccgctggtacgccggcgagccggtcatgatcaccaggaacgactacaaccttggg
ctcttcaacggggatgtggggctgatattgcccgacgccgagtcgggaggagagctgcgc
gccttcttcccgtcaggcaccggcggcatgaggaaagtcttgccgctcaggctcccggaa
tacgaatgcgccttcgccatgaccgtgcacaagagccagggttccgaattcgaccgcgtg
ctgctggtattgcccgaccgcgacaccccggtcctgacccgggagttgctctacaccgcg
attacccgggcgaaaacgtccgtcgacatcctggcgaaccaggagcttttcctcactacc
gtcgcgcgccgcgtcatcaggcgatcgggcctcagagacaaaacgtggaactgcaattga |