KEGG   Geobacter sp. M21: GM21_2084Help
Entry
GM21_2084         CDS       T00933                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gem  Geobacter sp. M21
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gem00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GM21_2084
Enzymes [BR:gem01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GM21_2084
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GM21_2084
DNA repair and recombination proteins [BR:gem03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     GM21_2084
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(2418215..2419030)
Genome map
AA seq 271 aa AA seqDB search
MPELPEVEVTRLGIAAQLVGARIAAVAVHSPKLRTLVPPELPSILAGQSILSLTRRGKYL
IITCRQGSLLLHLGMTGHLRLVPAGAGAGAHDHFDLVLESGLILRLNDVRRFGSIHFTSG
DPLKHKLLRGIGPEPLTDELTGHYLYRKSRGKKAPLQRFLMDSSVVAGLGNIYAAETLFR
CGMLPFTQAGSLSEGDCDRLCDCIKKTLAASIEAGRVMDFTVREEKLVYFPQQLYVYGRE
GLACRECGSAIERGRLGNRSTFHCPRCQSRL
NT seq 816 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaattacccgaagtcgaagtgacccggctggggatcgcagcacaactggtcgga
gccaggatcgccgctgtcgccgttcacagccccaaactgcgcaccctggtgccgccggaa
ctgccgagtattctcgccggccagagcatcctttcactgacccgtcgcggcaagtacctg
atcattacctgccggcagggctccttgctgctgcaccttggtatgaccgggcacctgcgc
ctggtccccgcgggcgccggcgccggcgcgcacgaccacttcgacctggtgctggagtcc
gggctcatactgcggctcaacgacgtgcgccgcttcggctcgattcacttcacctccggc
gatccgctaaagcacaaacttttgcggggaatcgggccggaacccttgaccgatgagctc
accggtcactacctctaccgcaaaagccgcggcaagaaggcgcccctgcagcgcttcctg
atggacagctccgtggtcgccggtctcggcaacatctacgcggcagagacgctgtttcgc
tgcggcatgcttccgttcacgcaggcgggctccctctccgagggcgactgcgacaggctt
tgcgactgtatcaagaaaaccctcgccgcctccatcgaggccggtcgcgtcatggatttc
accgtccgcgaggagaagctcgtctatttcccgcagcagctctacgtctacggcagggaa
gggctcgcctgccgggagtgcggcagcgccattgagcggggaaggctcggcaaccgctcc
accttccactgcccccgctgccagagccggctttaa

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