KEGG   Geobacter sp. M21: GM21_3054Help
Entry
GM21_3054         CDS       T00933                                 

Definition
helicase, RecD/TraA family (EC:3.1.11.5)
Orthology
K03581  
exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
gem  Geobacter sp. M21
Pathway
Homologous recombination
Brite
KEGG Orthology (KO) [BR:gem00001]
 Genetic Information Processing
  Replication and repair
   03440 Homologous recombination
    GM21_3054
Enzymes [BR:gem01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     GM21_3054
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3542354..3544534)
Genome map
AA seq 726 aa AA seqDB search
MKETPPTENVDRLSGSLERVTFHSEETGFCVLRVKVAGQRDLVTVTGAAASVTPGEYLEC
TGSWHNDRTHGMQFKAGHIKVVPPTTLEGIEKYLGSGMVHGIGAHFAKVLVKSFDAAVFD
VIENHPERLLELPGIGRKRMESVAGAWVEQKAIREIMVFLQSNGLGTARAVRIYKSYGNE
AIFKVTENPYRLALEIHGIGFKTADLLAAKLGIAPDSMIRAQAGVRHVLQEMSTSGHCAA
LRAELAESTASLLEIPQPVIESAIEAELAAENLVADQISGSPCVFLAPLYKAEVGVASGI
CRLRAGTPPWGGIVAEEAIPWVESQKGITLSASQRDAIRLALKSKVVVVTGGPGVGKTTL
VNSILGVIGRRPLRVTLCAPTGRAAKRLAESTGMEAKTIHRLLEFDPQSFGFKRCKENPL
HTDLLVMDEASMVDVVLMNKLLPAIPDHAGLIIVGDVDQLPSVGPGSVLSDIIESGAVPT
VRLTEIFRQAAGSRIIVNAHRINRGELPLKDEGKELADFYFIPAATPEDIHDKLLQVVRE
RIPKRFGFDPVREVQVLTPMNRGGLGTRSLNAELQGVLNGRGEPKVERFGTSYAPGDKVI
QTVNNYEKEVFNGDIGRIVEIRPEEGALTVDFDDRLVEYAFAELDEVSLAYATSIHKSQG
SEYTAVVIPLAMQHYTMLERNLLYTAVTRGKKLVVVIGEQKALAMAVQNQKSHRRLTRLA
GRIALT
NT seq 2181 nt NT seq  +upstreamnt  +downstreamnt
atgaaagagacacccccaaccgaaaacgtcgacaggctctcgggctcgctggagagggtc
accttccacagcgaggagaccggattctgcgtgctgcgggtgaaggttgccgggcagcgc
gacctggtgacggtgaccggcgccgcggcctcggtgacgccgggggagtaccttgagtgc
accggttcctggcacaacgaccggacccacggcatgcagttcaaggccgggcacatcaag
gtggtcccccccaccaccctggaagggatcgagaagtacctgggaagcgggatggtgcac
ggcatcggggcccacttcgccaaggtgctggtgaaatcgttcgacgcggccgtcttcgac
gtcatcgagaaccacccggaaaggctcctggagcttccggggatcggccgcaagcggatg
gaatcggtcgccggcgcctgggtggagcaaaaggcgatccgcgagatcatggtgttcctg
cagtccaacggccttgggaccgcccgggccgtgaggatctacaagagctacggcaacgag
gcgatcttcaaggtgaccgagaacccgtaccggctggccctggagatccacggcataggg
ttcaagaccgccgacctcttggctgcgaagctcgggatagcgcccgattccatgatccgg
gcccaggcgggggtgcggcatgtgctgcaggagatgtcgaccagcggccactgcgccgca
ctcagggcggaactggccgaaagcaccgcaagtttgctggagatccctcaaccggtgata
gagtccgccatcgaggcggagctcgccgcggagaacctggtcgccgaccagatctccggc
tccccctgcgtcttcctcgcgccgctctacaaggcggaggtaggcgtggcctccggtatt
tgccgccttcgcgccggcacgcccccctgggggggcatcgtcgccgaagaggcgattccc
tgggtggagagccaaaaagggatcaccctttccgcctcgcagcgcgacgccattcggctc
gccctcaagagcaaggtggtcgtggtgaccggcgggccgggggtgggtaagaccacgctg
gtcaacagcatcctcggcgtcatcggcagaaggccgctccgggtcaccctatgcgccccg
accgggagggccgcgaagcgcctcgccgagtcgaccgggatggaggcgaagaccattcac
cggctgctggagttcgatccgcagagtttcggtttcaagcgctgcaaggagaacccgctt
cacaccgacctcctggtcatggacgaggcgtccatggtcgacgtcgtgctgatgaacaag
ctccttcccgccattcccgaccatgccggcctcatcatcgtgggggatgtggaccaactc
ccgtcggtggggccggggtccgttttatccgacatcatcgagtccggcgcggtccccacg
gtgcggctcaccgagatcttccggcaggccgccggttccaggatcatcgtcaacgcccac
cgcatcaatcgcggcgaattgccgctgaaggacgaggggaaggagctcgccgacttctac
ttcataccggcggcgacgcccgaggacatccacgacaagctcctgcaggtcgtcagggag
cggatccccaagcgtttcggcttcgatcccgtgcgcgaggtccaggtgctcacgccgatg
aaccggggggggctcgggaccaggtccctcaacgcagagttgcagggggtgctgaacggc
aggggcgagccgaaggtggagcgcttcggcaccagctacgcccccggggacaaggtgatc
cagacggtgaacaactacgagaaggaggtcttcaacggggacatcggacgcatcgtcgag
atccgcccggaagaaggcgcactcaccgtggacttcgatgaccggctggtggaatatgcg
ttcgccgaattggacgaggtgagtctcgcctacgccaccagcatccacaagagccagggg
tccgaatacaccgccgtggtgatcccgcttgcgatgcagcactacaccatgctggagcga
aacctcctttacaccgccgtcacccgcggcaaaaagctcgtggtggtgatcggcgagcag
aaggcgctcgccatggcggtgcaaaaccagaagtcccaccgccgcctgaccaggctggcg
gggaggatagctctcacgtag

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