KEGG   Geobacter sp. M21: GM21_3301
Entry
GM21_3301         CDS       T00933                                 
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
gem  Geobacter sp. M21
Pathway
gem03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:gem00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    GM21_3301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gem03021]
    GM21_3301
   03400 DNA repair and recombination proteins [BR:gem03400]
    GM21_3301
Enzymes [BR:gem01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     GM21_3301
Transcription machinery [BR:gem03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     GM21_3301
DNA repair and recombination proteins [BR:gem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      GM21_3301
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: ACT19326
UniProt: C6E4N0
Position
complement(3837501..3838520)
AA seq 339 aa
MYRNWRDLIRPKKLQVETESLTNTYGKFFAEPFERGFGTTLGTGLRRVLISSLQGAAIVS
VKAKGVLHEFSAVPGVTEDMTDIILNLKGVRLKVHGNESRMIRIVQKGEGVVKAKDIITD
NNVEILNPEHHIATCSKDANLEMDLMVKVGKGYVPADRNRDEKAPVGTIPIDAIFSPVHK
VNFTVTNARVGQITDYDKLTIELWTDGSVKPQDAVAYASKILKDQLSIFINFDEDVEPQE
EAEPEEERERFNENLYRSVDELELSVRSANCLKNAGIKLIGELVSRSEAEMLKTQNFGRK
SLNEIKDILVDMGLTLGMKLENFPDPEIMRRLRGEQKEE
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgtatagaaactggcgcgatctgatcagacctaagaagctccaggttgagacggaatcg
ctcacaaatacatacgggaagttctttgccgaacccttcgaaaggggcttcggcaccacc
ctgggaacaggtctgcgtcgggtcctcatctcgagcctgcagggggcagccatcgtctcc
gtgaaggcgaagggcgtactgcacgagttctccgcagtcccgggcgtgaccgaggacatg
acggacatcattctgaacctcaagggtgtgcgcctcaaagtgcacggcaacgagtccagg
atgatcaggatcgtccagaagggcgaaggtgtggtcaaggccaaggacatcatcacggac
aacaacgtggagatcctgaaccccgagcaccacatcgcgacctgctccaaggacgcgaac
ctcgagatggacctcatggtcaaagtcggcaaagggtacgtccccgctgaccgcaaccgt
gacgagaaggctccggtcgggaccatccccatcgacgcgatcttctccccggtccacaag
gtgaacttcaccgtaaccaacgctcgcgtaggtcagatcaccgactacgacaagctcacc
atcgagctctggaccgacggcagcgtcaagccgcaggacgccgtggcctacgcttccaag
atcctcaaggaccagctttccatcttcatcaacttcgatgaggacgtggagccccaagag
gaggcggaaccggaggaggagcgcgagcgcttcaacgagaacctgtaccgctcagtggac
gagctggaactctcggttcgctccgcgaactgcctgaagaacgcagggattaagctgatc
ggcgaactcgtttccagaagcgaagccgagatgcttaagacccaaaacttcggcaggaaa
tctctgaacgaaatcaaggacatcctcgtcgacatgggcctcaccctcggcatgaaactg
gagaattttccggatcccgagatcatgaggcgcctgcgcggcgagcagaaagaagaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system