KEGG   Geobacter sp. M21: GM21_3446Help
Entry
GM21_3446         CDS       T00933                                 

Definition
DNA-formamidopyrimidine glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
gem  Geobacter sp. M21
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:gem00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    GM21_3446
Enzymes [BR:gem01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     GM21_3446
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     GM21_3446
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(3983262..3984047)
Genome map
AA seq 261 aa AA seqDB search
MPELPDLAVYAENLARKLTGKKIKTVSFHDRGRLNVAPDELSAALTGAKVAAVRRTGKQI
SFQADNGAVLRVHLMLTGGFVLTMAEQLDRLEAPVVSITFSDGSALAVSDPKGWATLALN
PQPDREAPDALELSADQLQQLCAKKPKTLIKALLLDQALIGGIGNAYADEILWEARISPK
SAAGKLPPEAVSALARAIPAVLKDAILELRKRHPDMVAGEYREFLKVHRPGLKQSPTGAA
VIKENISSKQTYYTEEQQLYK
NT seq 786 nt NT seq  +upstreamnt  +downstreamnt
atgcccgaactgccggatcttgctgtatatgcggaaaacctggcccggaagctgaccggg
aagaagataaagaccgtttccttccacgacagggggcgtctgaacgtcgctcccgatgaa
ctctccgccgcgctcacaggtgcaaaggtcgctgccgtgcgcagaaccggaaagcagatt
tctttccaggccgacaacggcgccgtcttgagggtccacctcatgctgaccggcggcttc
gtgctgaccatggccgagcagttggaccggctggaggcgccggtggtcagcatcaccttc
agcgacggttccgcgctcgcggtttcggatcccaaggggtgggcgacgctcgccttgaac
ccgcagccggaccgggaggcgccggacgccctggagcttagcgccgatcagttgcagcag
ttgtgcgcgaagaagcctaagacgctgatcaaggcgctgctcctggaccaggcgctcatc
ggcggcatcggcaacgcctacgccgacgagatcctgtgggaggcgcgcatctcacccaaa
tcggcggcgggaaaacttccccccgaggcggtctcggcgctggcgcgggccattcccgcc
gttcttaaggacgccatattggagctgcgcaaacgccacccggacatggtcgccggcgag
taccgcgagtttctcaaggtgcaccgccccggcctgaagcaatcgcccaccggcgcggcg
gtcatcaaggagaacatctcctccaagcagacctactacaccgaagaacagcagctctac
aaataa

DBGET integrated database retrieval system