KEGG T00846: Geob

Geobacter sp. FRC-32: Geob_1948

Entry

Geob_1948 CDS T00846

Gene name

sucA

Definition

2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2)

Orthology

K00164

2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]

Organism

geo Geobacter sp. FRC-32

Pathway

geo00020	Citrate cycle (TCA cycle)
geo00310	Lysine degradation
geo00380	Tryptophan metabolism
geo01100	Metabolic pathways
geo01110	Biosynthesis of secondary metabolites
geo01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Citrate cycle (TCA cycle) [PATH:geo00020]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:geo00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:geo00380]

SSDB

Motif

Pfam:

Transket_pyr E1_dh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

2180549..2183221

AA seq 890 aa
MPFNMNFSPEWIEEQYLLWQEHPERLPVDLQAFFNGFELGLEGGEGKADLRFAIKQSAVQ
SLIYRYRDIGHLLACTDPLSPCQIDHPLLSLEAFGLDASDLDKVFHTRRFMKESATLREI
LQVMHDTYCRSIGVEFMHIQEPAERQWLMDRMEPVRNSPSFSIGQKQEIAGHIYQAALFE
AFLNRKFAGQTRFSLEGGESLIPLLKWLMAGAAERGVTDLILGMPHRGRLNVLANVFDKP
LEEIFAEFADNSQHGIIGEGDVKYHKGYSIDVTPVGGHTIHLTLAANPSHLEAIDPVVEG
KCRARQDRCCDSRGDLVLPVLIHGDAAFSGQGVVAETFNLSQLEGYRTGGTVHIVLNNQI
GFTTLAADARSSCYATDGAKMVQAPVFHVQGDDPEAVVHATRLALEYRQAFRRDVVVEVI
CYRRYGHNEGDEPYFTQPLMYEKIKNRQPLHELYAMKLRDEGVDGAELEKLFRAVSAHLE
AAIGQEATDSDVGFREGWGGIERDYAPHKVETGVGAGELISMMEVLTAFPDGFTPHPKLA
TLLKRRLEAVKQGNGIDWATAENLAFASLLQEGTSLRLSGQDVRRGTFSQRHCTFFDYHT
EKMHVPLAALAKDNAVFNAYDSMLSEYAVLGFEYGYSVESPLGLTVWEAQYGDFANGAQV
VIDQFVSSGESKWDRGSGLVLLLPHGYEGQGAEHSSARIERFLQLCAMNNMQVCYPTTPA
QYFHLLRRQVKQPFRKPLVIFTPKSLLRNPLCVSTLDDFGGWFREILPAEDNPDKVRQVL
ICSGKIYFELLKEKMAAGREDVALVRIEQLYPLRLDLLRDTLLRYRQASFRWVQEEPRNM
GAWIFIRPQLEEITGGKVAYVGREEEAAPAVGSHRQHMVEQERVINDAFA

NT seq 2673 nt +upstreamnt +downstreamnt
atgccgttcaatatgaatttcagtcctgaatggattgaagagcagtaccttctttggcaa
gaacaccctgagcggctgccggtcgacctgcaggcatttttcaacggtttcgagttgggg
ctggaaggtggcgaaggcaaagcagaccttcgttttgcgatcaagcaatcggcggtgcag
tcgcttatctaccgctaccgggacatcggccacctccttgcctgtaccgatcccctttct
ccctgccaaatcgaccaccccctgctcagtcttgaagcattcggcctggatgcctccgac
ctggataaggttttccatacccgccgcttcatgaaggaaagtgcaactctgcgagagatc
ctgcaggtaatgcacgatacctactgccgctctattggtgttgaattcatgcatatccag
gaaccggcggagcggcagtggctgatggaccgcatggagccggtgcgaaacagcccctcc
ttttccattggccaaaagcaggagatagccggccatatttaccaggcagcgctattcgag
gcattcctcaaccgcaagttcgccggccagacccgcttctccctggaagggggggaaagc
ctgatacccctactcaagtggcttatggcaggagcggccgaacggggtgtcactgatctg
atcctggggatgccccaccgtgggcggcttaatgtattggccaatgtgtttgacaagccg
ctggaggaaatttttgccgagttcgccgataacagccagcatgggatcatcggcgaggga
gacgtaaaatatcacaagggatattccatagatgtaacgccggtgggcggccataccatt
catcttaccctggcggccaatccaagccatctggaggccatcgacccggtggtggaagga
aaatgccgggcacgccaggatcgctgctgcgacagccgcggcgacctggtcctgccggtc
cttatccacggcgatgccgccttttccgggcagggggtggtggccgaaaccttcaacctc
tcccagctggaaggctaccgcaccggcggcactgtgcacattgtcctcaacaaccaaatc
ggctttactacccttgctgccgatgcccgctccagctgttatgccaccgatggggcgaaa
atggtccaggctcccgttttccacgtccagggggacgacccggaggcggtggtccatgcg
acgaggctagccctggaataccggcaggcttttcgtcgtgatgtggtggtggaggtcatc
tgctaccggcgctacggacataacgaaggagacgagccctacttcacccagcccctcatg
tacgaaaagatcaagaaccgtcagccgctccatgagctgtacgctatgaaactgagagat
gaaggcgttgacggcgctgagctggaaaagctcttccgggcagtttctgcccatcttgaa
gccgctatcgggcaggaagccaccgactccgacgtggggttccgggaagggtggggcgga
atcgagcgggattacgccccccataaggtcgaaaccggagtcggggcaggagaacttatt
tccatgatggaggttctgacggcctttccggatggctttacgccacatccgaaactggca
accctgctgaaacggcggcttgaagcggtgaaacagggcaacggcatcgactgggccacc
gcggagaatctggcctttgcttcacttctgcaggaaggtacttcccttcgtctttccgga
caggatgtgagaagaggcaccttcagccaacgtcattgcaccttcttcgattatcacacc
gaaaagatgcatgttccccttgctgccctggccaaagataatgcagtattcaacgcttac
gacagcatgctttccgagtatgctgtgctcggtttcgaatacggctactcggtggagtcc
cccttgggactgaccgtatgggaggcccagtacggagatttcgccaacggtgcacaggtt
gtcatcgatcagttcgtctcctcgggggaaagcaagtgggaccggggaagcggtctggtc
ctgctgcttccccacggctacgaggggcagggagccgagcattccagcgccaggatcgag
cggttcctccagctctgcgccatgaacaacatgcaggtgtgttatccgacaactccggcc
caatatttccatctgctgcgacgtcaggtaaagcagcccttcagaaagccgctggttatt
ttcactcccaaaagcctgctccgcaatcccctctgtgtctcaaccctggatgatttcggc
ggctggttccgggagatcctgcccgcagaagacaacccggacaaggttcggcaggtgctg
atctgctcaggcaagatctatttcgagctgcttaaggagaagatggctgcggggcgggaa
gacgtggcactggtgaggatcgagcagctttatcctctgcgtcttgacctgcttcgcgat
acccttctcagataccggcaggcctcctttcgctgggtacaggaagaaccgcgcaacatg
ggggcatggattttcatccggccgcagcttgaggaaataacaggcggcaaggtggcatac
gtggggagggaggaggaagcggcgccggccgtcgggtcccatcggcagcacatggtggag
caggaacgggtgataaatgatgcatttgcctag

All links

Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (13)   
   KEGG COMPOUND (13)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-GEO (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (34)   

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