KEGG   Gemmata sp. SH-PL17: VT84_18005
Entry
VT84_18005        CDS       T04358                                 
Symbol
cefD
Name
(GenBank) Isopenicillin N epimerase
  KO
K04127  isopenicillin-N epimerase [EC:5.1.1.17]
Organism
ges  Gemmata sp. SH-PL17
Pathway
ges00311  Penicillin and cephalosporin biosynthesis
ges01100  Metabolic pathways
ges01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:ges00001]
 09100 Metabolism
  09110 Biosynthesis of other secondary metabolites
   00311 Penicillin and cephalosporin biosynthesis
    VT84_18005 (cefD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01008 Polyketide biosynthesis proteins [BR:ges01008]
    VT84_18005 (cefD)
Enzymes [BR:ges01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.17  isopenicillin-N epimerase
     VT84_18005 (cefD)
Polyketide biosynthesis proteins [BR:ges01008]
 Nonribosomal peptide tailoring proteins
  Others
   VT84_18005 (cefD)
SSDB
Motif
Pfam: Aminotran_5 Aminotran_1_2 Cys_Met_Meta_PP
Other DBs
NCBI-ProteinID: AMV26297
UniProt: A0A142XGU7
Position
complement(4171377..4172681)
AA seq 434 aa
MSNERQPVPNASAAPNWGAARAQIILDPTVTMLNTGSFGPLPRPVFDHATALRLRLAAGP
TDFFVRQVPPLLWEARERTAAFLGTKPHRLVFTSNVSAAINLVASGLKLNAPGEILMSDH
EYGAMIWCWERVAQRQGLTIRTFPLPTMATDPGAIVEAATRAMSPRTRLLFFSHVLSPTG
LVLPAQELCAEARKRGIISVVDGAHAPVYIPLNVSDVNADFYTANLHKWLLAPSGAGFLV
IGPGNEDRLQPLHVSWGYHADKYPLGAAVKPGSAGDRSRDTTSEVARSDGPDARDNYGST
PRTRFLEFEGTRDICPWLAVPTAIDFQTELGFDAVRGRIAELAAYTRRVIGATGLPLATP
ARPGMCGAMTAFELPPGLSAPALRKEFWARRVEIPVIERPNRLLVRVSHHFYTTEGEIDR
LAEVLPDVLAASRD
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgagcaacgaacgtcagccggtcccgaacgcgagtgcggcccccaattggggagcggcc
cgcgcccagatcattctcgatccgaccgtcacgatgctcaataccggctcgttcggtccg
ctcccgcgcccggtgttcgaccacgcgaccgcgctgcggctccggctcgcggccgggccg
acggacttcttcgtgcgccaggtgccgccgctgttgtgggaagcacgcgagcgcaccgct
gcgttcctcggcacgaaaccgcaccggctcgtgttcacctcgaacgtgtccgcggcgatc
aacctggtcgcgtccgggctgaagttgaacgcgcccggcgagatcctgatgtcggaccac
gagtacggtgcgatgatctggtgctgggagcgcgtcgcgcagcgccaggggctcacgatc
cgcacattcccgctgcccacaatggcgaccgaccccggcgcgatcgtggaagccgcgacg
cgagcaatgtccccgcgcacgcgactcctgttcttcagccacgtcctgtcaccgacgggg
ctggtgctcccggcgcaagaactgtgtgcggaagctcgtaagcgcggaatcatttcggtc
gtggacggcgcccacgcgcccgtttacatcccgctcaacgtttccgacgtgaacgcggac
ttctacaccgcgaacctgcacaagtggctgctcgccccgagcggcgcggggttcctcgtg
atcggccccgggaacgaagatcggttgcagccgctccacgtgagctggggttaccacgcg
gacaaatatccccttggagcagccgtgaagcccggctctgcgggcgacaggtcgcgagac
acaacgagcgaggtggcccggtccgatggaccggacgcgcgcgacaactacggcagtacc
ccgcggacccggttcctggagttcgagggcacgcgcgacatctgcccgtggctcgcagta
cccaccgcgatcgatttccaaaccgaactcgggttcgacgccgtgcgcgggcgcatcgca
gaactggccgcgtacacgcgccgggtgatcggcgccaccgggttaccgctcgcgaccccg
gcgcggccgggcatgtgcggggcgatgaccgcgttcgagttgccgcccggcctcagcgcc
ccagcgcttcgtaaagagttctgggcgcgccgcgtggaaatcccggtgatcgagcgcccg
aaccggttactggtccgggtgagccaccacttctacacgaccgagggcgaaatcgaccgg
ttggccgaagtgctgcccgacgttctggccgcgagtcgcgattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (3)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (32)   

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