KEGG   Geospiza fortis (medium ground-finch): 102037307
Entry
102037307         CDS       T03755                                 
Symbol
RPP38
Name
(RefSeq) ribonuclease P/MRP subunit p38
  KO
K14523  ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102037307 (RPP38)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:gfr03009]
    102037307 (RPP38)
   03016 Transfer RNA biogenesis [BR:gfr03016]
    102037307 (RPP38)
   03029 Mitochondrial biogenesis [BR:gfr03029]
    102037307 (RPP38)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.5  ribonuclease P
     102037307 (RPP38)
Ribosome biogenesis [BR:gfr03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RNase MRP
     102037307 (RPP38)
Transfer RNA biogenesis [BR:gfr03016]
 Eukaryotic type
  5'processing factors
   Ribonucrease P
    102037307 (RPP38)
Mitochondrial biogenesis [BR:gfr03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   RNase MRP
    102037307 (RPP38)
SSDB
Motif
Pfam: Ribosomal_L7Ae RNase_P_pop3 EF-hand_1 EF-hand_5
Other DBs
NCBI-GeneID: 102037307
NCBI-ProteinID: XP_005418652
UniProt: A0A6I9HDK6
Position
Un
AA seq 282 aa
MSVIQQGTATLRKAKKTTVKTCLDNPFVFQWKTIDGEDMHFILETLEERIKHIGLKKIES
GRKKKRSLTKKQTERKCDAGTNDFPKEEAESHQQKPGWTDISIRRQLAIGVNEVTKALEK
NELLLLLVCKSAKPAMITSHLVELSASRATPAGQVPRLSETLAPLLGLTSILALGFKKHS
DTFTEAIAAIIPKIPALEVPWFQNRTEESMAYADTDSSGSLEPEELAEVLEDKLASQKRK
HTERSQPDLSHVILQPLKIKKLVPNPNKIKKPPRKKKKAFSA
NT seq 849 nt   +upstreamnt  +downstreamnt
atgtctgtaattcagcaaggcacagcaacacttcggaaagcaaagaaaaccactgtaaaa
acgtgtctagataacccctttgttttccaatggaaaaccatcgatggagaagatatgcat
tttatactagagaccttagaagaaaggattaaacatattggacttaaaaagattgagagt
ggaagaaagaaaaaacgttccctgacaaaaaaacaaacagaaagaaaatgcgatgccggc
accaatgatttccctaaagaggaagcagaaagccaccaacaaaaaccaggatggactgac
ataagtatcagaagacagcttgctattggagttaacgaagttacaaaagcattggaaaaa
aatgaactcctgctcttgctggtgtgcaagtctgccaaacccgctatgatcacgtcgcac
ctggtggagctgagcgcgagccgcgccacgccggcagggcaggtgccgcggctcagcgag
accctcgcgcccctcctcggcctaacgtccatcctggcgctcggcttcaaaaagcactct
gacacgttcactgaagctatagcagcaataatcccaaagataccggccttggaagtgccg
tggtttcagaacagaactgaagaatccatggcttacgcagatacagattcttcaggaagt
ctggaacccgaagagcttgcagaggtgctggaggataagctcgcaagtcagaagcggaag
catacggaaagaagtcagcccgatctttcacatgtaattttgcagcctttgaaaatcaag
aaacttgtcccaaatcccaataagataaagaaaccacctcgcaaaaagaaaaaggctttt
tcagcataa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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