KEGG   Geospiza fortis (medium ground-finch): 102037899
Entry
102037899         CDS       T03755                                 
Symbol
TBPL1
Name
(RefSeq) TATA-box binding protein like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102037899 (TBPL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:gfr03000]
    102037899 (TBPL1)
   03021 Transcription machinery [BR:gfr03021]
    102037899 (TBPL1)
Transcription factors [BR:gfr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    102037899 (TBPL1)
Transcription machinery [BR:gfr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     102037899 (TBPL1)
  RNA polymerase III system
    TFIIIB
     102037899 (TBPL1)
  RNA polymerase I system
    SL1/TIF-1B
     102037899 (TBPL1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 102037899
NCBI-ProteinID: XP_005425718
UniProt: A0A8N5EWR9
Position
Un
AA seq 183 aa
MDADSDVALDILITNVVCVFRTRCHLNLRKIALEGANVIYKRDVGKVLMKLRKPRITATI
WSSGKVICTGATSEEEAKFGARRLARSLQKLGFQVIFTDFKVVNVLAVCNMPFEIRLPEF
TKNNRPHASYEPELHPAVCYRIKSLRATLQIFSTGSITVTGPNVKAVASAVEQIYPFVFE
SRK
NT seq 552 nt   +upstreamnt  +downstreamnt
atggatgcagacagtgatgttgcactggacattttaatcacaaatgtagtgtgtgttttt
agaacaagatgtcatttaaacttgaggaagattgcattagagggagcaaatgtgatatac
aagcgtgatgttgggaaggttttaatgaagcttaggaaacctaggattacggccacaatt
tggtcctcaggaaaagttatttgcacaggagccacaagtgaagaagaagctaaatttggt
gccagacgactagctcgtagtctacagaaactaggttttcaggtaattttcacagatttt
aaagttgtgaatgttttagcagtgtgcaacatgccctttgagataagattgccagaattt
acgaagaataacagacctcatgcgagttatgaaccagaacttcatcctgccgtgtgttac
agaataaaatctctcagagctaccttacagattttttccacaggcagtatcacagttaca
gggccaaatgtaaaggctgttgccagtgctgtggaacagatttatccattcgtgtttgaa
agcaggaaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system