KEGG   Geospiza fortis (medium ground-finch): 102038411
Entry
102038411         CDS       T03755                                 
Symbol
CHMP1A
Name
(RefSeq) charged multivesicular body protein 1A
  KO
K12197  charged multivesicular body protein 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04144  Endocytosis
gfr04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102038411 (CHMP1A)
  09143 Cell growth and death
   04217 Necroptosis
    102038411 (CHMP1A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102038411 (CHMP1A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gfr04147]
    102038411 (CHMP1A)
Membrane trafficking [BR:gfr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    102038411 (CHMP1A)
Exosome [BR:gfr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102038411 (CHMP1A)
  Exosomal proteins of other body fluids (saliva and urine)
   102038411 (CHMP1A)
  Exosomal proteins of colorectal cancer cells
   102038411 (CHMP1A)
SSDB
Motif
Pfam: Snf7 CHGN Spore_YpjB Cytochrom_B562 DUF6247 Sde182_NH-like Fes1
Other DBs
NCBI-GeneID: 102038411
NCBI-ProteinID: XP_005424884
UniProt: A0A6I9HNC2
Position
Un
AA seq 166 aa
MDGTSALQQKNVECARVYAENAIRKRNEGLNWLRMASRVDAVASKVQTAVTMKGVTKNMA
QVTKALDKALSSMDLQKVSAVMDKFEQQVQNLDVHTSVMEDSMSSATTLSTPQEQVDSLI
VQIAEENGLEIMDQLSQLPEGASALGESSVRSQEDQLSRRLAALRN
NT seq 501 nt   +upstreamnt  +downstreamnt
atggacgggacatccgccctgcagcagaagaacgtggagtgtgcccgtgtctatgccgag
aacgccatccgcaagaggaacgaggggctcaactggctgcgcatggcgtcgcgcgtggac
gccgtggcctccaaggtgcagacggccgtcaccatgaagggggtgacaaaaaacatggcc
caggtgaccaaggccctggacaaggccctgagctccatggacttgcagaaggtgtcggca
gtgatggataaattcgagcagcaagtgcagaatctggatgttcacacgtcggtcatggag
gactccatgagctcggccaccacgctgagcacgccgcaggagcaggtggacagcctgatc
gtgcagatcgccgaggagaacgggctggagatcatggaccagctgagccagctgcccgag
ggggcctcggccctgggggagagctctgtgcgctcccaggaggaccagctgtcccggagg
ctggctgccctgaggaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system