KEGG   Geospiza fortis (medium ground-finch): 102038546
Entry
102038546         CDS       T03755                                 
Symbol
SKP1
Name
(RefSeq) S-phase kinase associated protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03083  Polycomb repressive complex
gfr04110  Cell cycle
gfr04114  Oocyte meiosis
gfr04120  Ubiquitin mediated proteolysis
gfr04141  Protein processing in endoplasmic reticulum
gfr04310  Wnt signaling pathway
gfr04350  TGF-beta signaling pathway
gfr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102038546 (SKP1)
   04120 Ubiquitin mediated proteolysis
    102038546 (SKP1)
  09126 Chromosome
   03083 Polycomb repressive complex
    102038546 (SKP1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    102038546 (SKP1)
   04350 TGF-beta signaling pathway
    102038546 (SKP1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102038546 (SKP1)
   04114 Oocyte meiosis
    102038546 (SKP1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102038546 (SKP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102038546 (SKP1)
   04121 Ubiquitin system [BR:gfr04121]
    102038546 (SKP1)
   03036 Chromosome and associated proteins [BR:gfr03036]
    102038546 (SKP1)
Membrane trafficking [BR:gfr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    102038546 (SKP1)
Ubiquitin system [BR:gfr04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   SCF complex
    Adaptor protein
     102038546 (SKP1)
   Cul7 complex
     102038546 (SKP1)
Chromosome and associated proteins [BR:gfr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     102038546 (SKP1)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     102038546 (SKP1)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 102038546
NCBI-ProteinID: XP_005418741
UniProt: A0A6I9HEY4
Position
Un
AA seq 163 aa
MPSIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQ
WCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTC
KTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK
NT seq 492 nt   +upstreamnt  +downstreamnt
atgccttcaattaaactgcagagctcagatggagaaatcttcgaagttgatgtggaaatt
gcaaaacagtctgtgactataaagaccatgctggaagatttgggaatggatgatgaaggt
gatgatgacccagtccctcttccaaatgttaatgcagccatcttaaaaaaggtgattcag
tggtgcacccatcacaaggatgatccacctcctcctgaggatgatgagaacaaagaaaag
agaacagatgacatccctgtgtgggatcaagagtttctgaaagtagaccaaggaacactt
tttgaacttatcctggctgcaaattatttggacatcaaaggtttgctggatgtcacttgc
aagacagtggcaaacatgatcaagggtaaaactccagaagaaattcgcaagacattcaat
attaagaatgacttcactgaagaggaggaagcacaggtacgtaaagagaaccagtggtgt
gaagagaaatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (105)   
   KEGG ORTHOLOGY (1)   
   RefGene (101)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (123)   

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