KEGG   Geospiza fortis (medium ground-finch): 102039450
Entry
102039450         CDS       T03755                                 
Symbol
DDX20
Name
(RefSeq) DEAD-box helicase 20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gfr03041]
    102039450 (DDX20)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     102039450 (DDX20)
Spliceosome [BR:gfr03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    102039450 (DDX20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 AAA_30 UvrD-helicase CMS1
Other DBs
NCBI-GeneID: 102039450
NCBI-ProteinID: XP_014166143
Position
Un
AA seq 741 aa
MGNFKDVTKPVIPKPLKFILAAQHYLIVQAKSGTGKTCVFATIALDAVLLESPATQILIL
APTREIAVQIHAVITTIGIKMEGLECHVFIGGTPLSQDRSRLKKCHIAVGSPGRIKQLIE
LDYLNTASVRLLVLDEADKLLEEGSFQEQVNWIYSSLPVNKQMLAVSATYPESLAAALTR
YMREPTFVRLNPTDPALLGLKQYYKIVDSHPLPHKTFEEKTQHLQELFSKIPFNQALVFS
NLHSRAQHLAEILTSRGFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAE
KVNLVINLDVPLDWETYMHRIGRAGRFGTLGLAVTYCCRGEEENTMMKIAQKCNLQLLPL
PEPIPPGMMEQFEHGQVEVKPAIPPGPVVNCDTVCPKPEQPVLQPVQNGFPDIPQPPSNL
PRDSSSVERPKKTPKQKQMKKCTNPAKVEKNRTPQTSSCHTEQRNQVKPISRMDGQHSTQ
APDEEALKKNLPKIPCLSSFKTQLTSPWSFSDFVEDYDYFIKEGSEREVEILRSYSGPGE
QRGLPRNGDVEWEEMEHQPETAADEDVSADSNGSGSSRGSLNSRASNGSGSSRGSLNSRA
NNSCSEAFSDTQEPSPVPPARRGPPGFCPTPEKPREPSHSPRQKEVTKKVPKQNAKPKKS
HKHQFCSPATSRAEEEQSCSSWEDAAHQGWSSEHYWRCYYEAWQSYCSALSHYSRSYWHL
SCFSAYHTNSVYLQELLRDGD
NT seq 2226 nt   +upstreamnt  +downstreamnt
atggggaatttcaaagacgtgaccaagcctgtgataccaaagccattaaaattcattttg
gctgcccagcactatctcatcgtgcaggccaagtccggcaccggcaagacctgcgtgttc
gccaccatcgccctggacgccgtgctgctggagagccccgccacgcagatcctgatcctg
gctcccacgagggagatcgcggtgcagatccacgccgtgatcacgacgatcggcataaaa
atggaaggcttggagtgccatgtgttcatcgggggcactcctctgagccaggacagaagc
aggctgaagaagtgccacatcgctgtgggctccccagggcggatcaagcagctgatcgag
ctggactacctgaacacggccagcgtgaggctcctggtgctggacgaggcagacaagctg
ctggaggagggcagcttccaggagcaggtcaactggatctactcctccctgcctgtcaat
aagcagatgctggcggtgtcagccacctaccccgagtccctggctgctgctctcaccagg
tacatgagggagcccacgtttgtcaggctgaaccccacggacccagcccttcttgggctg
aagcagtactacaaaatcgtggattcccatccactcccacataaaacctttgaggaaaaa
acccagcacctgcaggagctgttcagcaagattcctttcaaccaagccttagtcttctca
aatttgcacagcagggctcaacatctggctgaaatcctgacatccagaggcttccctgct
gagtgcatttcaggcaacatgaatcaaaatcagcgacttgatgccatggctaaattaaag
caattccactgcagagttctgatttccacagacttgacatctcgtggaattgatgctgag
aaggtgaacctggtcatcaatctggatgtgcccctggactgggagacctacatgcaccgc
atcggccgcgccgggcgcttcggcaccttggggctggctgtgacctactgctgccgtggg
gaggaggagaacaccatgatgaaaattgctcagaagtgcaacctgcagcttcttcctctg
ccagagccaatcccccctggaatgatggagcagtttgagcatgggcaggtggaagttaaa
cctgcaatacccccgggtcctgtggtgaactgtgacactgtgtgtcctaaaccagagcag
ccagtgctgcagcctgtccagaatggctttccagacattcctcagcctccctctaatctt
ccaagggatagttcttctgtagaaaggccaaaaaagactccgaagcaaaaacagatgaaa
aagtgcacaaatcctgcaaaggtagagaaaaatagaacaccccagacttccagctgtcac
acagaacagaggaaccaagtcaaacccatctccaggatggatggacaacacagcactcag
gctccagatgaggaggccttaaaaaaaaatcttcccaaaattccatgcttgtcttctttc
aaaacccaactcaccagtccctggagcttctcagattttgttgaagattatgattatttc
attaaagaagggtcagagagggaagtggagattttaagaagttactcaggcccaggagag
cagcgtgggctgcccagaaatggggatgtggagtgggaagagatggaacatcagccagag
acagcagcagacgaggatgtgtctgctgacagcaatggctcagggagctccaggggttcc
ttgaacagcagggccagtaatggctcagggagctccaggggttccttgaacagcagggcc
aacaactcctgctctgaggccttttcagacacacaggagccaagccctgtgcccccagca
cgtcggggccccccaggtttctgtcccacaccagagaagcctcgggagccatcccacagc
ccaaggcaaaaggaagtgacaaagaaggtccccaaacaaaatgctaaacccaagaaaagc
cacaagcatcagttctgcagtcctgccacgagcagagctgaggaggagcagagctgcagc
tcctgggaggatgctgctcaccagggctggagctctgagcactactggaggtgctactac
gaggcctggcagagctactgctcagcactgtcccactacagcaggagctactggcacctg
agctgcttcagtgcctaccacaccaactcagtctatctccaggagctgctgagagatggg
gactga

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