KEGG   Geospiza fortis (medium ground-finch): 102041088
Entry
102041088         CDS       T03755                                 
Symbol
HELQ
Name
(RefSeq) helicase, POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
gfr  Geospiza fortis (medium ground-finch)
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102041088 (HELQ)
Enzymes [BR:gfr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     102041088 (HELQ)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    102041088 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 DNA_pol_lambd_f DUF3135 Cdd1 HTH_41
Other DBs
NCBI-GeneID: 102041088
NCBI-ProteinID: XP_014167433
UniProt: A0A6I9ZA29
Position
Un
AA seq 747 aa
MLESLQQRKNLIYSLPTGGGKTLVAEIIILQELLCRQKDVLMILPYVAIVQEKVRGLSSF
GIELGFLVEEYAGSKGRFPPIKRRVKKSLYIATIEKGHALVNSLIETERIDDLGLVVVDE
LHMLGAGSRGAVLEITLAKILYTSKKTQIIGMSATLNNVGDLQKFLQAEYYTNNFRPVEL
KEYIKIRDTIYAVDSKTENGFAFSHLLNFKYSSNLEKADPDHIIALVTEVIPKYSCLIFC
PTKKNCENVASMVCKYLKKEFRAHKEKEKQDLIKNLKSIGNGTVCPVLKQTIPFGIAYHH
SGLTNDERKSIEEAYSAGVLCLLACTATLAAGVNLPARRVILRAPYVGNDFLKKNQYKQM
IGRAGRAGIDSAGESILIVQEKDKHLVQDLVHSPMENCYSNLLLELTKGIQSLLLSLVGL
KIAVTCEEVDNFMCCTLLGVQQQLLSQEKSLAEIIKDGLENLIEKGLLKGRISEKDHNSK
STLTITPLGKAAYKGSIDLAYCNILYRELKKGLEGLVLESNLHLLYLSTPYDMTCSPDWM
IYLRQFNQLSAAEQKVADIVGVPESFITKKASGQAVRKNVDSAVVNRFYLTFVLYSLLKE
TNIWSVSEKFNLSRGYVQNLLNSAASFASCLLHFCEELEEFWVYKALLTELTKQLTYCVK
TELIPLMEVAGVLEARAKQLYNAGYKTLAHLANANPETLVRMIEHLSRRQAKQIISSAKM
LLSEKAEALQEEVEELLKVPTDIPGTH
NT seq 2244 nt   +upstreamnt  +downstreamnt
atgttagaatccctacagcaaaggaagaacttgatatactcattgccaactggtggtgga
aaaactcttgtagctgaaataataattctccaagaattactctgcaggcagaaggatgtt
ctgatgatcctgccatatgttgccattgtccaagaaaaggttaggggtttatcgagtttt
gggatagaattgggtttcctggttgaagaatatgcaggaagtaaaggaagatttccacca
atcaaaaggagagtaaagaaatctctttatattgctactatagaaaaaggacatgctctg
gtgaactccttaattgaaacagaaagaatcgatgacctcggcctggttgtggtagatgag
ctgcatatgctcggggcgggaagtcgtggagcagtactggaaattactctggcgaaaatt
ctttacaccagtaaaaagacacagatcattggcatgagtgcaacgttaaataatgttgga
gacctgcagaagttcctgcaagcagagtactacactaataattttagaccggtagaatta
aaggagtacataaagatacgagacaccatttatgcagttgacagcaaaacagaaaatggc
tttgctttttcacatctccttaatttcaagtattctagtaatctggagaaagcagatcct
gaccacatcattgcacttgttactgaagttattcctaaatattcctgtctaatcttttgt
cctactaaaaagaattgtgaaaatgtggcttcaatggtgtgcaagtacctcaagaaagaa
tttagagctcacaaggagaaagaaaaacaagatctcatcaagaacctaaagagtattgga
aatggaactgtctgtcctgttttgaagcagacaatcccttttggtattgcctatcaccat
agtggccttacaaatgatgaaaggaaaagcatagaggaagcttattctgcaggtgtcctg
tgtctgcttgcttgcacagccactctagctgctggagtgaacctaccagctagaagggtg
attctcagagctccttatgttggcaatgacttcctgaagaagaaccagtataagcaaatg
attggcagagctggtcgagctggtattgacagtgctggagaaagtattctcatagtgcaa
gaaaaagacaaacacttggttcaggatttagttcacagtcctatggagaactgctacagc
aatcttctgctggagttgaccaagggaatccaaagcctgttgttatctttggttggactg
aagatagcagttacctgtgaggaagtggacaattttatgtgctgtacattgctgggtgtt
cagcagcagctgctgtctcaagagaagagcctcgcagagataattaaagatgggctggaa
aatctaatagaaaaaggactcctaaaaggaagaatatctgagaaagaccacaattccaaa
tctacactgacaatcacacccctgggtaaagctgcatataagggctcaatagacttggcg
tactgcaatattctgtaccgagaattgaaaaagggtttggaggggctggttctcgagagc
aatcttcatctcctatatctgtcaactccctatgatatgacttgtagcccagattggatg
atatacttgagacagtttaaccagctaagtgcagcagagcaaaaagtagcagatattgtg
ggagtacctgaaagctttattacaaaaaaggcttctggtcaagccgtcagaaagaatgtg
gacagtgctgtggtgaacaggttctacctgacatttgtgctttattcactactgaaagag
accaatatatggagtgtttcagagaaatttaacttgtcccgggggtatgtgcagaatctc
ctcaattctgcagcctcctttgcatcctgccttctacatttctgtgaggaattggaagaa
ttctgggtttataaagccttgctgacagagcttaccaagcagctgacatactgtgttaag
acagaactcatccctctgatggaggtagcaggggttctagaggcacgagcaaaacagctt
tacaacgcagggtacaaaactttagcacacttggctaatgcaaatccagaaactttggtg
aggatgattgagcacttgtcacgacgtcaagccaaacaaataatttcatctgcaaagatg
ctgctgagtgaaaaagctgaggctttacaggaagaagtcgaagaactcttaaaagtgcca
acagatatcccagggacccactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (32)   

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