KEGG   Geospiza fortis (medium ground-finch): 102041458
Entry
102041458         CDS       T03755                                 
Symbol
ABCA1
Name
(RefSeq) ATP binding cassette subfamily A member 1
  KO
K05641  ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr02010  ABC transporters
gfr04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    102041458 (ABCA1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    102041458 (ABCA1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:gfr02000]
    102041458 (ABCA1)
Transporters [BR:gfr02000]
 ABC transporters, eukaryotic type
  ABCA (ABC1) subfamily
   ABCA1, 2, 3, 4, 7, 12, 13 subgroups
    102041458 (ABCA1)
SSDB
Motif
Pfam: ABC_tran ABC2_membrane_3 AAA_21 DUF4162 AAA_23
Other DBs
NCBI-GeneID: 102041458
NCBI-ProteinID: XP_005423636
UniProt: A0A6I9HJS0
Position
Un
AA seq 2261 aa
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIISRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLIENETFSDFLHHNVSMPSSAVEGLLDAGVNL
QQVIVSGYRMRLRDLCNSSTSSEFLMIQNQTATIDSEAFICTLSKEKLHAAEQVFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESIGKLVKELLSMKSWSDMRQEVTFLNNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDLHLPASNWTVEDVARFLSNSPEDFETENG
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
IEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGKLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSIKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHPHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSKLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPESRETDLLSGMDGKGSYQMK
GWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLELQ
PWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTAS
VPESVLDILLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQNL
TGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVKK
ILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQQ
GENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLAL
LLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNDKLKDIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTKI
YRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILSN
IQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGEK
YAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFFG
HAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq 6786 nt   +upstreamnt  +downstreamnt
atggctttctggacgcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attatttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaagctgggaaattcctctggc
ttagacttgaaacttcgggatttcctgattgagaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgccgtagaggggctactggatgcaggggtcaacctc
cagcaggtcattgtgtctggttatcgaatgcgactgagagatctctgcaatagctcaaca
tcatctgaatttctaatgatccaaaatcagacggcaaccatagattctgaagccttcatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagtcttccgtgctaacctgaat
cctttgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
actgtggaaactttgagagagagcattgggaagcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgacgttcctgaacaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgtggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctaatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaag
cccttgctgattgggaagatcttgtacactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaagatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacattgctgaaaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtagaggatgttgcccgtttcctgtcaaacagtccagaggactttgagacagaaaatggc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacctggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtccttggaacttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggactaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
atagaacaggccatcatcagggttcagacaggcacagagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctgttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgaaaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctcttctgatgagtgcaggactg
ttggtgctgatcctgaagatggggaagctgctgccttacagtgatcctagtgtggtgttc
attttcctctccatcttcggcgttgtgaccatcctccagtgcttcctcatcagcactgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtgctgtgtgttgcctggcaggaccacatcagcttctcaatcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgcgagtactttgcgctctttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctctatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcatattggtttggagaagaaccacaggacaggcagcacccccatcctgac
cagaaggggtcttcagaagtctgcaaggaagaagagccagtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acactcaacttctatgaaggacaaatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgtttcccccaacttcgggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcaggcagaacctaggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcgg
ctcaaagggctgccagaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaaactctctggtggcatgcagaggaag
ctctctgttgccttagcttttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgctatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtagactcctctctgagc
tcctgtcgaaacagcagcagcacagtttcctatttgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacattgacaatagatgtg
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagctttcgtggaa
ctgttccatgaaattgatgaccgtctttctgatcttggcatttccagctatggcatctcg
gaaactactctggaggagatcttcctgaaagtggctgatgatagcggtgtggatgcagaa
acctcagatggtacattgccagccagaaggaacaggcgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactctgacatagatcca
gaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccaaatgaag
ggctggaagctcactcagcagcagttcatggctctgttgtggaagaggatgctcattgcc
aagagaagccggaagggcttttttgcacagattgtgctgccagctgtctttgtgtgtatt
gctctcatgttcagcctgattgttcctccttttgggaagtaccccagcctggaattacaa
ccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgcaggc
actcacaagcttttggatgcccttcttgataagccagggtttgggacacgctgtatgcag
ggacattccatcccggacactccttgcactgtggggcagaaggaatggaccactgcttca
gtcccagagtcagtgctggatatcttgctgaaaggcaactggagcatggagaatccttcc
ccatcttgcgagtgtagcagtgagaagatcaagaagatgctgcctgtgtgccctcctggt
gcaggtggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaatctg
acaggccgcaatatatcagactacctagtgaagacctacgcacagatcattgggaaaagc
ttaaagaataaaatctgggtgaatgagttcaggtatggtggcttttccttgggagccagc
agttcccttgtgcttcctccaagtcatgaagtcactgatgccattaaacaggtgaagaaa
attttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagtttc
atgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctggcat
gccattgcatccttcctgaatgtgatcaacaatgcgatccttcgggccaacctccagcag
ggtgaaaatcccagtgcttatgggatcactgccttcaatcacccactgaacctcaccaag
cagcagctgtctgaagtagctctgatgaccacctctgtggatgttcttgtgtccatctgt
gtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggagcgt
gtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgttatctactggctg
gccaactttgtgtgggatatgtgcaactacattgttccggccacactagttgtcatcatc
ttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggctctc
ctcctgtttctctatgggtggtccatcacccctctcatgtatccagcctcctttgtgttc
aaaatccctagcacagcatatgttgtgctgaccagtgtgaatctcttcatcggcatcaat
gggagtgtggccacctttgtcctggagctcttcaccaacgataagctgaaggacatcaat
gacatcctgaagtctgtcttcctcatcttccctcacttctgcctgggccggggactcatt
gacatggtgaaaaaccaggctatggctgatgctctggagagatttggagagaatcggttt
gtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaaggt
gtggtgttttttctcatcacagtgctcatccagtacaggttcttcatcaaacccaggcct
gtctatgccaagctgcctcctgtgaatgatgaagacgaggatgtaaccagagagaggcag
aggataattagtggaggaggacagagtgacattttggaaatcaaggagctaaccaagatt
tacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctggagag
tgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgctaact
ggtgatacagatgtcacaggaggagaagctttcctcaaaggaaacagtatcttgtccaac
atccaagaagtccatcagaacatgggctactgcccacagtttgatgctgttaatgaactg
ctgacagggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaagaa
gtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaaaaa
tacgctgggaattacagtggggggaacagacgcaagctttccacggccattgccctcatt
ggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagcacgt
cgtttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctcaca
tctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaatggg
cgattcaggtgtctaggcagtgtccagcacctaaaaaacagatttggagatggttacacc
atagtggtgagaattgcaggggcaaatccagacctgaagcctgttgaggagttctttggg
catgccttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaactt
ccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaagaga
ctccacatagaagactactctgtttctcagaccacacttgaccaagtttttgtaaatttt
gctaaggaccaaagtgatgacgaccatactaaggacctgtcattgcacaaaaaccagact
gtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagttgt
gtgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (28)   

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