KEGG   Geospiza fortis (medium ground-finch): 102042023
Entry
102042023         CDS       T03755                                 
Symbol
APTX
Name
(RefSeq) aprataxin
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102042023 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gfr03400]
    102042023 (APTX)
Enzymes [BR:gfr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     102042023 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     102042023 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     102042023 (APTX)
DNA repair and recombination proteins [BR:gfr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     102042023 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     102042023 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA
Other DBs
NCBI-GeneID: 102042023
NCBI-ProteinID: XP_005425064
UniProt: A0A6I9HMC8
Position
Un
AA seq 400 aa
MQVLVTCFALNFRNLNQVSKIGSANGWAGTRIHGPCSTGRWPSGSNTLFILLYSSVMRVC
WLVGKEKCTQQVKLPHLEAVVIGRGPETGITDKKCSRQQVQLKADCNKGYVTVKQIGVNP
TSVDLVNIGKDEVVKMKPGQVLHIVNNLYPYTVQFTEESGKTVPETDKMPHEGSCENDDI
ELVPRKTMKLEVVDTQGSSTNPKLSNTSVTTHEGTSSRKEHLGHWSQGLKSSMQDPKMQV
YKDEKIVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLALLEHMHAVGQKMIEQCPARE
SLEFRLGYHAIPSMSQLHLHVISQDFDSPALKTKKHWNSFTTDYFLNSQDVIEMVRSKGK
VMVKDHTSELLKLPLRCHRCKQQLSTIPQLKEHLRKHWPK
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgcaagtgctggtgacatgctttgctttgaatttcagaaacttgaaccaagttagcaaa
attggctcagctaatggatgggctggcaccagaattcatggaccctgttccacaggaagg
tggccctcaggaagtaacacactgtttattttgctctatagctcagtgatgcgtgtgtgc
tggctcgtaggcaaagagaaatgcacccagcaagtgaaactgccacacttagaagctgtg
gtaattgggcgtggcccagagactgggataacggataagaagtgctcacgacagcaagtt
cagttaaaagcagactgtaacaaggggtatgtcacggttaaacagataggggtcaaccca
actagtgttgatcttgtgaatattggcaaggatgaagtggtgaaaatgaagccaggccaa
gttctgcatattgtaaataacctttacccctacacggtgcaatttaccgaagagtctggg
aaaactgttccagaaacagacaagatgccacatgaaggctcctgtgagaatgatgatata
gagcttgtgcccagaaaaacaatgaagttggaggtggtggatacacaaggcagttctaca
aatccaaagctaagcaatacaagtgtaactacgcatgaaggaacttcgagcagaaaggaa
catttgggacactggagtcagggtctaaagagctccatgcaagatccaaaaatgcaggtt
tacaaagatgaaaagattgtagtcatcaaggataaatatcctaaagcacgttaccactgg
cttatcttaccatgggaccctatttcaagcctgaagtcagtcaccagggaccaccttgca
ctcctggaacatatgcatgctgttgggcaaaaaatgatcgaacagtgccctgccagagag
agcctggagttccgactgggttaccatgctatccccagtatgagtcagctacatttgcat
gtaatcagccaggattttgattctccagccctgaaaaccaaaaagcactggaattctttt
actacagactacttcttaaactctcaagatgtgatagagatggtaagaagcaagggaaaa
gtgatggtgaaagaccatacctctgaacttctcaaacttcctctcagatgccatcgctgt
aaacaacagctgtccacaatcccacagttaaaggaacatcttcggaaacattggccaaaa
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (3)   
   KEGG ENZYME (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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