KEGG   Geospiza fortis (medium ground-finch): 102044141
Entry
102044141         CDS       T03755                                 
Symbol
ATG4B
Name
(RefSeq) autophagy related 4B cysteine peptidase
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
gfr  Geospiza fortis (medium ground-finch)
Pathway
gfr04136  Autophagy - other
gfr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:gfr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    102044141 (ATG4B)
   04136 Autophagy - other
    102044141 (ATG4B)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:gfr01002]
    102044141 (ATG4B)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gfr04131]
    102044141 (ATG4B)
   03029 Mitochondrial biogenesis [BR:gfr03029]
    102044141 (ATG4B)
Peptidases and inhibitors [BR:gfr01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   102044141 (ATG4B)
Membrane trafficking [BR:gfr04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    102044141 (ATG4B)
Mitochondrial biogenesis [BR:gfr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    102044141 (ATG4B)
SSDB
Motif
Pfam: Peptidase_C54 ATG4_LIR
Other DBs
NCBI-GeneID: 102044141
NCBI-ProteinID: XP_014164134
Position
Un
AA seq 428 aa
MVFQPLEETVFGEVLTAEKGILGNLKGEQRKPTKKQATSTLTYDTLRFEYEDFPETKEPV
WILGRKYSVFTEKEEILLDVTSRLWFTYRKNFPAIGGTGPTSDTGWGCMLRCGQMIFAQA
LVCRHLGRDWRWIKGKRQMDNYFNVLNAFIDKKDSYYSIHQIAQMGVGEGKSIGQWYGPN
TVAQVLKKLATFDTWSSLAVHIAMDNTVVMEEIRRLCQSHVPCAGAAACPALESDVLYNG
CPEDLGLRGRLPLWKPLVLLIPLRLGLTEINEAYIETLKHCFMMPQSLGVIGGKPNSAHY
FIGFVGEELIYLDPHTTQPAVEPGDSGCLPDESFHCQHPPCRMSIAELDPSIAVGFFCNT
EADFNDWCQQIKKLSLVRGALPMFELVERQPSHFSNPDVLNLTPDSSDADRLERFFDSED
EDFEILSL
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggtcttccagccgcttgaagaaactgtctttggtgaagtgctcactgcagagaaagga
atacttgggaatctgaaaggggaacagagaaaacccactaaaaaacaagctacatctacg
cttacctacgacaccctcaggtttgaatatgaagacttccctgagaccaaagaacctgtt
tggatccttggcaggaaatacagtgtttttacagagaaggaagagatcctgctggatgtg
acctctaggctttggttcacctacagaaagaacttccctgccattggaggaacaggtccc
acctctgacacgggctggggctgcatgctgcgctgtggccagatgatctttgctcaggcc
ttggtctgcaggcatttgggaagagactggaggtggataaaagggaagaggcagatggat
aattacttcaacgttcttaatgccttcattgacaaaaaagacagctactactccattcac
cagatagcccagatgggagtcggggagggaaaatccataggccagtggtacggcccgaac
acggtcgcacaggtgctcaaaaaacttgcaacttttgatacgtggagttccctggcagta
cacatagccatggacaacacagtggtgatggaagaaatccggaggctgtgccagtcccat
gtgccatgtgctggagctgcagcatgccctgccctggagtcagatgtgctctacaatggg
tgcccagaggacctggggctcagagggaggctccccctgtggaaaccactggtgctgctg
atacctctccgcctcgggctcacagagatcaatgaagcctacattgaaacactaaagcac
tgcttcatgatgccccagtccctgggagtgatcggagggaagccaaacagtgctcactac
ttcattggctttgtaggtgaggagctcatttacctggacccccacaccacgcagccggcg
gtggagcccggtgacagcggctgcctccccgacgagagcttccactgccagcacccgccg
tgcaggatgagcatcgccgagctcgacccctccatcgccgtgggctttttctgcaacaca
gaggcagactttaatgactggtgccagcaaatcaaaaagctgtccctggtcagaggagcg
ctgcccatgttcgagctggtggaacgccagccctcccacttctccaaccccgacgtcctg
aatctcacaccagactcctctgatgccgacagattggaaaggttctttgattcggaagat
gaagactttgaaatcctgtccctttga

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