KEGG   Gallus gallus (chicken): 395878
Entry
395878            CDS       T01006                                 
Symbol
PAPOLA
Name
(RefSeq) poly(A) polymerase alpha
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
gga  Gallus gallus (chicken)
Pathway
gga03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    395878 (PAPOLA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    395878 (PAPOLA)
Enzymes [BR:gga01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     395878 (PAPOLA)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     395878 (PAPOLA)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 Polbeta DUF4269
Other DBs
NCBI-GeneID: 395878
NCBI-ProteinID: NP_001185530
CGNC: 8431
Ensembl: ENSGALG00000033099
Position
5:46671235..46712547
AA seq 737 aa
MPFPVTTQGSQTQQLQKHYGITSPISLAAPKEFDCMLTQKLIETLKPYGVFEEEEELQRR
ILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVERSDFFTSFYEKLKQQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPED
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWD
PRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKL
FEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGNLEKNEFITLAHVNPQSF
PAPKENPDKEEYRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEMDM
KIAARHVKRKQLHQLLPNHVLQKKKKHSTEGVRLTALNDSSLDLSMDSDNSTSVPSPTSA
MKTSPLNSSGSSQGRSSPAPAVTAASVTNIQASEVTVPQTNSSESSGGSSNESIPQTATQ
PAISPPPKPTISRIASSTHLLNPSPRISGNVATKTPSPVTAVKRTSSPHKEDSPKKMKIE
EDEISETTSCIDVNEHERMETKELLETEVNVNSQMEHLQTTLQAPQKTPSTDLSDIPALP
ANPIPVIKNSIKLRLNR
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgccgtttcctgttacaacccagggatcacaaacacagcaactgcagaagcattatggc
attacctcacctatcagtttagctgcccccaaggagtttgactgcatgcttacccagaaa
ttgattgaaacccttaaaccctacggtgtatttgaagaggaagaagaactgcaacgcagg
attttaattttgggaaaactaaataacctggtaaaggaatggatacgggaaatcagtgaa
agcaagaatcttccacagtctgtaatagaaaatgttggaggaaaaatttttacatttgga
tcctatagattaggggtccatacaaaaggtgctgatatcgatgccctgtgtgttgcacca
agacatgttgaaagaagtgattttttcacatcattttatgaaaaactgaaacagcaagaa
gaagtgaaagatttgagggctgttgaagaagcttttgtcccagttattaaactatgtttt
gatggaatagagattgatattttgtttgcaagattagcactgcaaactattcctgaggac
ttagacctccgagatgatagcctacttaaaaatttagacattagatgcatacgaagtctt
aatggttgccgggtaaccgatgaaattctgcatctagtaccaaacattgacaacttcagg
ttaacactgagagctatcaaactgtgggcaaaacgccacaacatctattccaatatacta
ggtttccttggcggtgtttcctgggctatgctagtagcaagaacttgccagctttatcca
aatgcaatagcatcaactcttgtacataaatttttcttggtgttttctaaatgggaatgg
ccaaatccagtgctattgaaacagccagaagaatgcaatcttaatttgcctgtatgggac
ccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcataccca
cagcagaactctacctacaatgtgtccgtttccacacggatggtcatggttgaggaattt
aaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagagtggtccaaactt
tttgaagctccaaacttctttcaaaagtacaagcattatattgtgcttctagcaagtgca
ccgacagaaaaacaacgactagaatgggtgggtttggtggaatcaaaaatccgtattcta
gttggaaacctggagaagaacgagttcattacactggctcatgtgaatccacagtcattc
ccagcgcccaaggagaatcctgacaaggaagaataccgtacaatgtgggtgattgggttg
gtgttcaagaaaactgaaaattctgaaaatttaagtgttgatcttacttacgacatccag
tcttttacagatacagtttataggcaagcaataaacagcaagatgtttgagatggatatg
aagattgctgcaaggcatgtgaaacgtaagcaacttcatcaactgctacctaatcacgtg
cttcagaaaaagaaaaagcattcaacagaaggagtcagactgacagctctgaatgacagc
agcctagacttgtctatggacagtgataacagcacgtctgtgccttcgcctactagtgct
atgaagacgagtccattgaacagttctggaagttctcagggcagaagcagtcctgcgcca
gctgtaacagcagcatctgtgaccaacatacaggcttctgaagtcactgtgccacaaaca
aattccagtgaaagctcagggggttcttcaaatgaaagcattcctcaaactgccacacaa
ccagccatttctccaccaccaaagcctaccatctctagaattgcttcctcaacacatcta
ttaaatccatcacccagaatttcaggaaatgttgcaacaaaaacacctagccctgtcaca
gcagtgaaaaggacatcttctccccataaagaagattctcccaagaaaatgaaaattgaa
gaggatgaaataagtgaaactactagctgtatagatgtgaatgagcatgaaagaatggaa
acgaaggagctattggagacggaagtgaatgttaattcccaaatggaacatcttcagaca
actttgcaagctcctcagaaaacacccagtacagatctttccgatatccctgctctccct
gcaaatcctattcctgttatcaagaattcaataaaattgagattgaaccggtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (31)   
   RefSeq(nuc) (13)   
   GenBank (9)   
   EMBL (9)   
Protein domain (6)   
   Pfam (6)   
All databases (67)   

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