KEGG T01006: 396240

Gallus gallus (chicken): 396240

Entry

396240 CDS T01006

Gene name

CAPN1, calpain

Definition

calpain 1, (mu/I) large subunit (EC:3.4.22.52)

Orthology

K01367

calpain-1 [EC:3.4.22.52]

Organism

gga Gallus gallus (chicken)

Pathway

gga04141	Protein processing in endoplasmic reticulum
gga04210	Apoptosis

Class

Genetic Information Processing; Folding, sorting and degradation; Protein processing in endoplasmic reticulum [PATH:gga04141]
Cellular Processes; Cell growth and death; Apoptosis [PATH:gga04210]

SSDB

Motif

Pfam:

Peptidase_C2 Calpain_III EF-hand_6 EF-hand_1 EF-hand_7 EF-hand_8

Other DBs

NCBI-GI:

NCBI-GeneID:

Ensembl:

UniProt:

Position

AA seq 705 aa
MMPFGGIAARLQRDRLRAEGVGEHNNAVKYLNQDYEALKQECIESGTLFRDPQFPAGPTA
LGFKELGPYSSKTRGVEWKRPSELVDDPQFIVGGATRTDICQGALGDCWLLAAIGSLTLN
EELLHRVVPHGQSFQEDYAGIFHFQIWQFGEWVDVVVDDLLPTKDGELLFVHSAECTEFW
SALLEKAYAKLNGCYESLSGGSTTEGFEDFTGGVAEMYDLKRAPRNMGHIIRKALERGSL
LGCSIDITSAFDMEAVTFKKLVKGHAYSVTAFKDVNYRGQQEQLIRIRNPWGQVEWTGAW
SDGSSEWDNIDPSDREELQLKMEDGEFWMSFRDFMREFSRLEICNLTPDALTKDELSRWH
TQVFEGTWRRGSTAGGCRNNPATFWINPQFKIKLLEEDDDPGDDEVACSFLVALMQKHRR
RERRVGGDMHTIGFAVYEVPEEAQGSQNVHLKKDFFLRNQSRARSETFINLREVSNQIRL
PPGEYIVVPSTFEPHKEADFILRVFTEKQSDTAELDEEISADLADEEEITEDDIEDGFKN
MFQQLAGEDMEISVFELKTILNRVIARHKDLKTDGFSLDSCRNMVNLMDKDGSARLGLVE
FQILWNKIRSWLTIFRQYDLDKSGTMSSYEMRMALESAGFKLNNKLHQVVVARYADAETG
VDFDNFVCCLVKLETMFRFFHSMDRDGTGTAVMNLAEWLLLTMCG

NT seq 2118 nt +upstreamnt +downstreamnt
atgatgccctttggggggatcgctgcccggctgcagagggaccgcctgagagccgagggg
gtcggcgagcacaacaacgctgtcaagtacctcaaccaggactatgaagccctcaagcaa
gagtgcatcgagagtggcaccctcttcagggacccccagttcccagctggccccactgcc
ctcggcttcaaggagctggggccatactccagcaagacacggggcgtggagtggaagcgt
ccatcggaattagtggatgaccctcagttcatcgttggtggtgcaacccggacagatatc
tgccaaggagctctgggtgactgctggctgctggctgccatcggctccctcactctcaac
gaggaactcctgcaccgtgtggtgccccacgggcagagcttccaggaggactacgctggc
atcttccacttccagatctggcagtttggtgaatgggtggatgtggtggtggacgacctg
ctgcccaccaaggacggggagctcctgtttgtgcattcagcagagtgcacagagttctgg
agtgctctgctggagaaggcttacgccaagctgaacggctgctacgagtcgctctcaggg
ggcagcaccactgagggctttgaggatttcaccggcggcgtagcggagatgtatgacctc
aagcgggcaccgcgcaacatgggccacatcatccgcaaggcactggagagggggtccctg
ctgggctgctccatcgacatcacaagtgcctttgatatggaagcagtgaccttcaagaag
ctggtgaaaggccatgcctattctgtcaccgccttcaaagatgtgaactaccggggtcag
caggaacagctcatccgtatcagaaacccctggggtcaggtggagtggactggagcctgg
agcgatggttcttccgagtgggacaacattgaccccagcgacagagaagagctgcaactg
aagatggaggatggagagttttggatgtctttccgggacttcatgagggagttctccagg
ctggagatctgcaacctaacccccgatgccctcaccaaagatgagctcagcaggtggcac
acacaggtgttcgagggcacatggcgccgagggagcactgctgggggctgcaggaacaac
ccagccacattctggatcaatccccagtttaagatcaagctgctggaagaggatgatgac
cctggggatgacgaggtggcttgcagcttcttggtggccctgatgcagaagcaccgtagg
agggagcggcgagtagggggcgacatgcataccatcggcttcgctgtctacgaggttcct
gaggaggcccagggaagccagaatgtgcacttgaagaaggacttcttcctgcgaaaccag
tcgcgggcacgctctgagaccttcatcaacttgagggaagtgagcaaccagatccggctg
ccccctggcgagtacatcgttgtgccctccacctttgagccacacaaggaggccgacttc
atactgcgggtcttcaccgagaagcagtcagacacagcggagctggatgaggagatctcg
gcagacctggcagatgaggaagaaataaccgaggacgacattgaggatggtttcaagaac
atgttccagcagctggcaggggaggacatggaaatcagcgtcttcgagctcaagacgatt
ctgaacagagtgatcgccagacacaaagatctgaagacggatggcttcagtctggactcc
tgccgcaacatggtcaacctgatggataaagatggcagtgcccgcctggggctggtggag
ttccagatcctatggaacaagatccgcagctggctgacaatcttccgccagtatgacctg
gataaatcaggcaccatgagctcatacgagatgcgcatggctctagagtcagctggtttc
aagctgaataacaagctgcatcaggtggtggttgcccgttacgcagatgctgagacgggc
gtggacttcgacaactttgtctgctgcctggtgaagctggagacaatgttcaggttcttc
cacagcatggatcgtgatggcactggaaccgctgtcatgaatctcgctgagtggctgctg
ctgacaatgtgcggctag

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UniGene (1)   
   ENSEMBL-GGA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (28)   

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