KEGG   Gallus gallus (chicken): 415656
Entry
415656            CDS       T01006                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X2
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
gga  Gallus gallus (chicken)
Pathway
gga03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    415656 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gga03019]
    415656 (EDC4)
Messenger RNA biogenesis [BR:gga03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     415656 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     415656 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 Uteroglobin INTS5_N
Other DBs
NCBI-GeneID: 415656
NCBI-ProteinID: XP_004944119
CGNC: 1139
Ensembl: ENSGALG00000040875
UniProt: A0A1D5PW21
Position
11:913151..944428
AA seq 1352 aa
MASSNSIDIEDATQHLRDILKLDRPGGSVNENQRPSSSYNGDLNGLLVPDPLVAGDGPAL
AKPVHRSISLGAVQEKQVICLSGDDSSTCIVISAKDVEIVASSDSSITSKARGSNKVKIQ
PVARYDWEQKYYYGNLIAVSNSYLAYAIRAASNGSAMVRVLSVSTAERTLLKGFTGGVAD
LAFAHLNSNQLACLDEAGNLFVWRLAMEEDKIQEEILVNIKRPDGTPLNTSRRIIWCPFI
PDDNEENSEEGSQTLALLHEDRAEVWDLDIIRSNNRSWPVEVPNIKEGFIVVKGHSTYLS
EGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQD
PEVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSPDIFSSMSILPSLKVCLDLSAEYL
ILSDVQRKVLYVMELMQNQEKGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLPAE
EENDNLSIEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMGASVPSHGSH
EEFAFPDHIADLGAEGLGSEKGSVHGSQPDLRRIADLPVPADFLSLSNDAKPKLMTPDAF
MTPSTSLQQITVSPGSSVSSLTAVTAMSSTSVTDASMSRPSEDLTVSPKMQLDTSLTLSS
SSSSLQTSPRSHSVLIPGLPDKLTPKAPVPVTPGGNSSLALELQEVEPLVVPQASPTRER
SPDVISSASTAMSQDIPEIASETLQRSFAAAPPALSAEVLEPSHHADSMASAASALHLLS
PRNRHNSEHSHHSLDMPPVEVDRLNAPSLLETALTQENASLDSVVSQPWPAAPDITRETR
NSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQRDVNQSPRSSNNQVTPEFQEE
LMCVLRSQQRELSELRQNQMELLQRLTDHLDAVQSSLMGHMERVIDSQQEQEQRRLDRAL
TEGQQRNGQLQEHLSQQLSQTLSSAVCNRLERTVREEMKKTVPQCISKSVDPVAGQLSST
IATKLTAVEGTLKENITKLVKSKNLTDSVVRATADTLQGPIQSAYREAFQSVVLPAFEKS
CQSMFQQINDTFKQGTQEYIQQLETHMKNKKAREQEARDPLLNQLRQLISTFQSSTEQLA
STIAANIHAEVQHQLHIIVGNLQESILTQVQRVIKGEVSLAMKEQQAAVTSSIVQAMRSA
AGTPIPSTHLDFQSQQTHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDTQQVFGQQ
PCPLSQPVLLSLIQQLSSDLGTRTELKLNYLEEAVMHLDHSDPITRDHMGSVMSQVRQKL
FQFLQVEPHNTLSKPARRLMIMLQGLVTPGMT
NT seq 4059 nt   +upstreamnt  +downstreamnt
atggcctcctccaacagcatcgacatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccggccgggaggttcggtgaatgagaaccagagaccatcaagttcctataac
ggagacctgaatgggctgctggtgcctgatcccctcgtggctggagatggacctgcgctg
gcaaagccggtgcaccgcagcatttctctgggagctgtgcaggagaagcaagtcatctgc
ctttctggtgatgacagctccacttgcatagttatatcagcaaaggatgtggaaatagtg
gccagcagtgattccagcatcaccagtaaggccagagggagtaacaaggtgaaaatacag
cctgttgctagatatgactgggagcagaagtactattatggcaatctgatagctgtttca
aactcttacctggcttatgccattagagctgccagcaatggctctgctatggtgcgagtg
ttgagcgtcagcactgcggagcggaccttgctgaaggggttcacaggtggtgtggcagac
ctggcttttgctcatctcaactccaaccagctggcgtgcctggatgaggctggcaacctc
ttcgtctggcgcctggccatggaggaggacaaaatccaagaggagatcttggtgaacatc
aaacgacccgacggcacccctctgaacacctctcgaagaatcatctggtgtcctttcatc
ccagatgataatgaagagaacagtgaagagggaagtcaaacgttggcattgctgcacgag
gacagggcagaggtatgggatttggacattatccgctcaaacaacagatcctggccagtg
gaagtgcctaacatcaaagaaggcttcattgtagtgaaaggccacagcacgtacctgagc
gagggagcactttctccggatggaactgtgttggccacagcaagtcatgatggttttgtc
aaattctggcagatctatattgaggggcaagacgagccaagatgtcttcatgagtggaaa
ccacatgatgggaggcctctttcctgcctgctcttctgtgacaaccacaaaaagcaagac
ccagaggttcccttctggaggtttctcatcacgggagcagatcagaacagagagctgaag
atgtggtgcactgtgtcttggacctgcctgcagaccgtccgattctctcctgacatcttc
agctccatgagtattcttcccagcctgaaagtctgcctggacctctctgctgaatatcta
atactgagcgatgtgcagagaaaagtcttgtatgtgatggagctgatgcagaaccaagag
aagggcaaagcttatttcagttccatctcagagtttctcctaacccatccagtcctcagc
ttcggcatccaggcagtgagccgctgccggttaaggcacactgaggtgcttccagcagaa
gaggaaaatgacaacttgagtatagaaggtgctcagggagcaggggctgttgagtcagca
gctggcgtgctgataaaactcttctgtgtgcacaccaaagctctacaagatgtgcagatc
agattccagcctctccatagtcctgacatgggtgcatctgtgccttcccatggctctcat
gaagaatttgcctttccagatcacatagcagatctaggcgcagaagggctgggatcagaa
aaaggatctgtgcatggctctcaaccagacttgcgacgtatcgctgatctgcctgtacca
gcagacttcctttcgctctcaaatgatgccaagcctaagctgatgactccagatgcattc
atgacaccgagcacatctctccaacagatcactgtatctccgggcagcagtgttagttcc
ctgactgcagtcacagccatgagcagcacttctgtcacagatgcttctatgtccaggccg
tcagaagacttgactgtgagccccaagatgcagctggacaccagcctcacgctgagtagc
agtagcagcagcctccaaactagtcctaggagccattctgttcttatcccaggccttcct
gacaagctgacaccaaaggcacctgttccggtcacacctgggggaaactcctctctagct
ctggagctgcaggaagtagagcccttggtggtacctcaggcttctcccacccgtgagcgc
tcgccggacgtcatttcctctgcttccacagccatgtcccaggatatccctgagattgct
tccgagaccttgcagcgtagctttgcagcagctccacctgcgctctctgcagaggtgctg
gagcccagtcatcacgcagacagcatggcatctgcagcctcagccttgcatttgctgtct
ccgaggaaccggcacaattcagagcacagccaccactctttggacatgcctccagtggag
gtggacagactgaatgctccgtcgttactggagactgctttaactcaggaaaatgcgtct
ttggacagtgttgtgagtcagccgtggccagcagctcctgacataaccagagaaaccagg
aacagcatggcagacagcccaagggatgaggttgaagaaaagcacaagagctcttcctat
catcgacacagctaccaccttctgcagcacgacagccaggatgctagtgcagaacaaagg
gatgtgaaccagtcaccaaggtcatctaacaaccaggtgacaccggagttccaggaagag
ctgatgtgtgtgctgaggagccaacagcgtgagctgtctgagctgcgtcagaaccagatg
gagctgctgcagaggctcacagatcaccttgatgccgttcagagctcactgatgggccac
atggagagggtgatcgactcccagcaggagcaggagcagaggagactggaccgagcactg
acagaaggacagcagcgcaacgggcagctccaggagcatctctctcagcagctctctcag
accctttccagtgctgtgtgcaaccgtctggagaggactgttcgtgaggagatgaagaag
acagtgccccagtgcatttccaagagcgtggacccagttgctggccagctaagtagtact
attgctaccaagctcactgctgttgaggggacgctgaaagagaacatcaccaagctagtg
aaatcaaagaaccttacagatagcgttgtgagggcaacggccgataccctgcagggccca
atccagtcagcctacagggaagccttccagagcgtcgtgttgccagcctttgagaagagc
tgccagtccatgttccagcagatcaatgacaccttcaagcagggcacgcaggaatacatt
cagcagctcgagactcacatgaagaacaagaaggcacgagaacaggaggcccgggaccca
ctgctgaatcagcttcgacagctcatcagcacctttcagagcagcaccgagcagctggct
tccaccatcgcagccaatatccatgctgaggtgcagcaccagctgcacattattgtgggc
aaccttcaggagtctattttgactcaggtgcagagagtcattaaaggagaagtgagcctg
gccatgaaggagcagcaagcagctgtcacctcgagcattgtccaggcaatgcgttcggct
gcagggactcccatcccctccactcacctggacttccagtctcagcaaactcacatcctt
cagctgctccagcagggccacctcaaccaagctttccagcaggctctaacagcagctgat
ctcaacctggtcctgtatgtctgtgagacagtggacacgcagcaagtgtttggccagcag
ccgtgcccgctgtcccagcccgtgctgctctcactcattcagcagctctcctcggatttg
ggtacccgtacggaactgaagctgaattacctggaggaggccgtgatgcacctggaccac
agtgaccccatcacccgggaccacatgggctcggtcatgagccaggtgcggcagaagctc
ttccagttcctccaggtggaaccccacaacacgctgagcaagcctgcacgccgcctgatg
atcatgctgcagggcctggtcactcctggcatgacctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (40)   

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