KEGG   Gallus gallus (chicken): 415697
Entry
415697            CDS       T01006                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
gga  Gallus gallus (chicken)
Pathway
gga04137  Mitophagy - animal
gga04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gga00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    415697 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    415697 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    415697 (AMFR)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     415697 (AMFR)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    415697 (AMFR)
  Multi subunit Ring-finger type E3
   ERAD complex
    415697 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    415697 (AMFR)
SSDB
Motif
Pfam: G2BR zf-RING_2 CUE zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_11 zf-rbx1 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-RING_5 Prok-RING_4 zf-C3HC4_4
Other DBs
NCBI-GeneID: 415697
NCBI-ProteinID: XP_414064
CGNC: 2249
Ensembl: ENSGALG00000003107
UniProt: F1NBB7
Position
11:2163177..2183840
AA seq 622 aa
MPLLFLERFPWPSLRTYAALSGLALLAAALSAQRALSAAGEQRAGGPRALDVAYYLLSDS
LCVWVLVNTACCVLMLVAKLIQRVVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQT
VEEVVMWCLWFSGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLVAMLLSCCGLA
VVCGVIGYTHGMHTLAFMAAESLLVTVRTAHVILRYVIHLWDLNHEGTWEGKGTYVYYTD
FVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGN
MEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLEQDTSCPTCRMS
LNITDSHHVREDHQRENLDENLVPVAVAEGRPRLNQHNHFFHFDGSRIASWLPSFSVEVM
HTTNILGITQASNSQLNAMAHQIQEMFPQVPYHVVLQDLQLTRSVEITTDNILEGRIQVP
FPTQRAEAVRPASNSSVERHSADQEDTGTVTQTKRVPLELNSRLEEMGELSEVEAEPSEA
EDFEARGSRFSKSADERQRMLVQRKEDLLQQARKRYLNKTSDEELSTEKPSVPEGASADP
VTLRRRTLAAAAERRLQMQQNS
NT seq 1869 nt   +upstreamnt  +downstreamnt
atgccgttgctgttcctggagcgcttcccctggcccagcctgcgcacgtacgcggcgctc
agcggcctggccctgctggccgccgccctcagcgcccagcgcgccctcagcgcggccggc
gagcagcgggcgggcgggccgcgggccctggacgtcgcgtactacctgctgtccgacagc
ctctgcgtctgggtgctcgtgaacacggcgtgctgcgtgctgatgctggtcgctaagctg
atccagcgtgtggtgttcggcccgctgcgcgtcagcgagaggcagcatcttaaggataag
ttctggaatttcatcttttacaagttcatcttcatttttggtgtgctgaatgttcagaca
gtggaagaagtggtcatgtggtgcctctggttctctgggcttgtgtttcttcatctcatg
gtccagctctgcaaggatcgctttgaatatctgtccttctctccgacaacacccatgagc
agccacatcagagtactgaccctgcttgtcgccatgctgctgtcctgctgcgggctggca
gttgtctgtggtgttattggctacacccatgggatgcacaccttggctttcatggcagca
gagtctctgctggtgacagtcagaactgctcatgtgattttgcgatatgtaattcatctc
tgggatctcaaccatgaaggaacgtgggaaggtaaaggcacatatgtgtactacacggat
tttgtcatggagctgaccttgctttcgctggacttgatgcatcatatccatatgctgctg
tttggcaatatctggctgtcgatggcaagcctggtgatcttcatgcagctgcgctacctg
ttccatgaggtccagcgaaggattcggcggcacaagaactacctgcgtgtggttggaaac
atggaggcccggtttgcagttgcaacacctgaggagctagcagtcaataatgacgactgt
gccatctgctgggactccatgcagtctgcacggaagctcccctgtggccatctcttccac
aactcttgcctgcggtcctggctcgaacaagacacatcttgcccaacctgcagaatgtct
cttaatatcactgacagccatcatgtgagggaggatcaccagagggagaatctggatgag
aacctggtccccgtggcagtagcagaaggcagaccacgcttgaaccagcacaatcacttc
ttccacttcgatggctctcgaattgccagctggctgcccagtttttcagtagaagtgatg
catactaccaacatccttggtatcacacaagccagcaactcccagctcaacgctatggcc
caccagattcaggagatgttccctcaggttccttatcatgtagttctgcaggatctgcag
ctgacccgttctgtagagataaccactgacaacatcttggaagggcgcatccaagtgcct
ttccctacacagcgtgcagaggctgttagacctgcttcaaacagttctgtggaacggcac
agcgctgaccaggaggatactgggacagtcacccagaccaaaagagtgccacttgaactc
aactcaagactggaagaaatgggagaactgagcgaagtggaggcagaacccagtgaagca
gaagattttgaagccaggggaagtcgcttttcaaagtcagctgatgagaggcagcgcatg
ttggttcagcgaaaggaggacttgttgcagcaagctcgaaagcgttacttgaacaaaacc
tcagatgaagagctgagcacggagaagccctcagtgcccgagggagcctctgctgacccg
gtgacactgcgccgcaggacgctggcagccgctgccgagcggagactgcagatgcagcag
aactcatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (14)   
   Pfam (14)   
All databases (49)   

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