KEGG   Gallus gallus (chicken): 416431Help
Entry
416431            CDS       T01006                                 

Gene name
USP42
Definition
ubiquitin specific peptidase 42
Orthology
K11855  
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.1.2.15]
Organism
gga  Gallus gallus (chicken)
Brite
Enzymes [BR:gga01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.2  Thioester hydrolases
    3.1.2.15  ubiquitin thiolesterase
     416431 (USP42)
Peptidases [BR:gga01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   416431 (USP42)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
CGNC: 
Position
14
AA seq 1338 aa AA seqDB search
MTIVKPKSSKSKKSSSRRSGKSKKPSAKNMKSRTANWGRIPPAKDPNQVSVNQGRGGAIY
CRSSEKSKPFALRDLVINDGIAPPQRILFPPEKICMDWQQTQNVGVGLFNLGNTCFINSA
LQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMETHINRVLCCAHDAIKPAFVVHELKR
IGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQIFGGFLRSRVKCL
NCKAVSDTYEAFLDIPLDIKTVSSVTKALEQFVKPEQLDGENCYKCSKCKKMVPASKRFT
IHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSGV
NSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFYIRRYDLTLGERAFYLP
APSYPRSFLGQRGTNSKQAGFMGPRLPPHMIKNSSRLNGNGSLKEDPNTVGVTLKRPSSA
PPTACVQNWAITRPSITDPSKKQKITISIHNKLPARQTVSQPDCLRALEEEEELNKSVPS
FTVTNSSAAESTSNASTMLFATNISEVPDEIFVEPVVNGNPKLSSDNMVSYGTESSGKPE
DESSKGLFTRNCNIISSNGILIGKVCTLQNSYSSCQNAEEERSKHELPKNDSLNGANSLD
NEPKENGLKLDDSSCQVPPVKPSEMLFPKTNGVLETMPIALSPDPQEIILDSFTYGQLNS
LSEEISVPGPQKSSENDSLMETVVMEALLVYEESRKLPCDLSCEAGNLFIQSDSETISTK
EVVAESIMTKADNAQLNINGQHKVRKRSLDTEDEFLENFESEDSDDKDKPRRSKEPDLIS
KENPLYIKGSPETEEELGQASSIKSDVECSSKKPACLDTADKCQDTKDISNNYVEVPPVN
DSSITKLDKVLESQFSRENEGPTNRNCEENKHRKKDKHIYESKKTDKEHYRRKREHSDTE
EREKQNSKPDGHSHKRRCSRSVETNKQNRRKQDYCNGNKYRSSYTERSSPDVSRNSGKYS
HYRSRSRGREQGRNRYYHSKGERTWSRERYYQDEPWRWQKCRHYNDYYYSHAKGDSRERK
FSHYNKDFDRSSQAYSRSHKDYHYKSRRPHHSLSREEDVRHFSSHRADSRHCSVPQQQSE
KYSYERHILPPVLTHLRFEDSSPKNEKQSYRKRKYADSSESETERKSRKIEKEVLDDEKM
KKYKKVKKKKKSKDKHREKDYKLYDSDFSVLHFDNDNRRRKKKKKKKKHIRKLKGFLEYL
DPRFLKKTWEKEGSCSPADCLREQYRNEGSKQPDKEGKPSSCASEIENYISTASKEYIKG
KGPLRTLREFFLNSYRDY
NT seq 4017 nt NT seq  +upstreamnt  +downstreamnt
atgaccatagttaagccaaaatcttctaagtctaaaaaatcctcatcgaggcgatctggt
aaatccaagaagcccagtgctaaaaatatgaagtcacgcactgcaaattggggccggata
ccacctgcaaaagatccgaaccaggtctctgtgaaccaaggacgtggaggtgctatttat
tgtaggtcatccgaaaaatctaaaccttttgcccttagagatttagtcattaatgatgga
attgctccaccacaaaggattctttttccacctgagaagatttgtatggattggcagcaa
acacaaaatgttggagttggactcttcaatcttggcaatacgtgctttattaattctgct
ctacagtgtttgacctacacacccccgttagccaactacatgctctcccttgagcacacc
cagtcgtgcaattatcaaggcttttgcatgatgtgcactatggaaactcacattaaccga
gtcctgtgttgtgctcacgatgccatcaagcctgcatttgttgtccatgaacttaaacga
attggaaaacatttccgttttggcgctcaggaagacgcgcacgagttcttacgcttcact
gttgatgctatgcagcaagcctgtttgcatggatgtaccatattagacagatcttctcaa
gcaaccaccatcattcatcaaatatttggaggatttctaagatccagagtaaagtgcttg
aactgcaaagcagtttcggatacatacgaggcattccttgatatacctctggatataaag
acagtttcatctgttaccaaagctctagaacaatttgtgaaacccgaacagctggacggt
gaaaattgctataaatgtagcaaatgcaagaagatggtgccagcatcaaagagatttaca
atacatcgctcttccaatgttctcacgatatcactgaaaagatttgcaaatttcacgggt
ggaaaaatcaacaaggaagtaaaatatcctgagtatttggatcttcgagcttatatgtct
caatcaattggagaaccactcatttatgccttatatgccgttttagtacatagtggtgtc
aattctcatgccggacactatttctgcttcataaaggctgctgatggactttggtatcag
atgaatgatgcttcagtagtgcaaagtaacatcaaaacagttcttggtcagcaagcttat
ttactgttttatatcaggcgctacgatttgacacttggagaacgtgctttttacttacca
gcaccgtcttatccccgttcattccttggccagagggggactaatagtaagcaggctggc
tttatgggaccacgacttcctcctcatatgattaagaattcaagtcgtttaaatggaaat
ggatctttaaaagaggatcccaataccgttggtgtcaccttaaaaaggccatcttcagct
ccacccacagcttgtgttcaaaactgggccattaccaggccttccattactgacccatca
aaaaaacagaagatcactatcagtattcataacaaattgcctgcacgtcagaccgtgtca
cagcctgactgtctccgtgctctggaggaggaggaggagctaaacaagtctgttccttcg
ttcacagttacaaattcttctgcagcagagtctacctcaaatgcatctacaatgttattt
gctactaatatttcagaagttccggatgaaatttttgttgagccagtggtgaatggaaat
cctaaactcagctctgataacatggtctcttatggtacagaatcttcaggaaaacctgag
gacgagtcttcaaagggcttatttacaaggaattgcaacattatatcttctaatggaatt
ttgattggaaaggtctgtacactgcagaactcctattcttcgtgtcagaatgctgaagag
gaaagatccaaacatgagctgccaaaaaatgattcactaaatggtgctaatagtttagat
aatgaacctaaagaaaatggactgaaacttgatgattccagttgccaagtcccacctgtt
aaaccttccgaaatgttatttcctaaaaccaatggagtgcttgaaacaatgcctatagct
ttgtctccagaccctcaagagataatcttagattcctttacatacggccagttgaacagc
ttgtcagaggaaataagtgtccctggacctcagaaatcttctgagaacgattctcttatg
gaaacagtagtgatggaagcgctgttggtctatgaagaatccaggaaacttccctgtgac
ttgagctgtgaggctgggaatctttttattcaatcagattctgaaaccatttctaccaaa
gaagttgttgctgaaagtattatgacaaaagctgataatgcacaactcaatatcaatggt
cagcacaaggttaggaaaagatccttggacactgaagatgaattccttgaaaattttgag
tctgaagacagtgatgacaaagacaaacctagaagatcaaaagaacctgatctcatttca
aaagaaaatcctttgtatatcaaagggtctcctgagactgaagaggaattaggacaggct
tcctctataaagtctgatgttgaatgtagttctaaaaaacctgcatgtctggatactgca
gataaatgccaagatacaaaggacatatctaataactatgtagaagtaccacctgttaat
gactcttctattacaaagctggataaagttttggagagtcaattttctagagaaaatgag
ggaccaactaataggaattgtgaagaaaataagcataggaaaaaagataaacatatatat
gagtctaaaaaaactgacaaagagcactaccgaagaaaaagagaacactctgatacagag
gagagagagaagcaaaacagcaaaccagatggtcattcccacaagaggaggtgctctcgt
agtgtggaaacaaataagcaaaatcgtcgtaagcaggattattgcaatggaaacaaatac
agatcttcctataccgaaagaagcagccctgatgtcagcagaaactcagggaaatattct
cattacagatctcgaagcagaggacgagaacaaggtaggaatagatactaccattccaaa
ggagagagaacttggagcagagaaaggtactatcaagatgaaccctggagatggcaaaaa
tgcagacactacaatgattactattattctcatgcaaaaggagatagtcgagaaagaaag
ttctcccattacaataaagattttgacagatcaagtcaagcttacagcaggtcacataag
gattatcattacaaaagcagacggcctcaccactcactctctagagaggaggatgtacgt
cactttagcagccacagagcggactcccggcactgttcagtacctcagcagcaatctgag
aagtattcttatgaaagacatatacttccacctgtgttaactcatttacgttttgaagac
tcttccccaaaaaatgaaaaacaaagctacagaaaaaggaaatatgcagacagcagtgaa
agtgaaacagaaaggaaaagcagaaagatagaaaaagaggttttggatgatgaaaagatg
aaaaaatacaagaaagtcaagaagaaaaagaagtccaaagataaacatcgagagaaggat
tacaaactttatgattcggatttctctgtgctccactttgacaatgacaatcgcagacgt
aagaaaaaaaagaaaaagaagaaacacatcaggaaattgaaaggcttcttggaatattta
gatcctcgtttcctgaagaaaacatgggagaaggaaggatcttgctctcctgctgactgt
ttacgtgagcaatacagaaatgagggcagtaaacaacccgacaaggaagggaagccttct
tcctgtgccagtgaaatcgagaactacatctccactgcatccaaagagtatattaaaggt
aaggggcccctaaggacgcttagggaattctttcttaattcatatagagattattaa

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