KEGG   Gallus gallus (chicken): 417041
Entry
417041            CDS       T01006                                 
Symbol
TRIM39.2
Name
(RefSeq) tripartite motif containing 39
  KO
K12015  tripartite motif-containing protein 39 [EC:2.3.2.27]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gga04121]
    417041 (TRIM39.2)
Enzymes [BR:gga01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     417041 (TRIM39.2)
Ubiquitin system [BR:gga04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    417041 (TRIM39.2)
SSDB
Motif
Pfam: PRY SPRY zf-C3HC4_4 zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 U-box zf-RING_6 zf-C3HC4_3 zf-RING_2 zf-RING_10 Baculo_IE-1
Other DBs
NCBI-GeneID: 417041
NCBI-ProteinID: NP_001006196
CGNC: 14968
Ensembl: ENSGALG00000037170
UniProt: Q5ZIJ7
Position
16:complement(2499936..2503957)
AA seq 463 aa
MDEDNPAESFQDEASCSLCLGFFQDPVSIHCGHNFCRACITRCWEEQEETFSCPRCKATA
TQRNLRPNRELAKIIEIAKRLSLRAPSAGERLCERHREVLKLFCEEDQVPICLVCRESHA
HRLHAAVPIEEAVEEQKEKIQAHVQILKEKKEKLQGLKEAEEGKSLEFLEKVQQERQKVV
LDIKELQQFVEQQERLLLGRLEKLDQEIVRRKEENLAKLLEEISSVSEQIRELEEKCQQP
PCEFLQDSRNILSRLENEKSQQAPEILPGAEENPASPPQKNTALKETLMQFRESLTLDPD
TAHPRLVLSEDHRCVRWEEARHPVPDNPKRFDSSRCVLGCQGFNAGRHYWEVEVGDGEAW
AVGVAKESVERKGRISVKPEVGIWAVGQCGAQYQALTSPTSPITLHSAPKVIGIYLDYEA
GRVAFFDANNEVPIFAYPPTSFGGERVLPLLCLGRGCRFTLSP
NT seq 1392 nt   +upstreamnt  +downstreamnt
atggatgaagataacccagctgagagcttccaggacgaggcctcctgctccctctgcttg
gggttcttccaagatcccgtctccatccactgcgggcacaacttctgcagggcgtgcatc
acccgctgctgggaggaacaggaggaaaccttctcctgccctcgctgcaaggcgacggcc
acgcagcgcaacctgcgacccaaccgcgagttggccaagatcattgagattgccaaaagg
ctgagcctgagggccccaagcgctggggagaggctgtgcgagaggcaccgggaggtcctg
aagctgttctgcgaggaggaccaggtgcccatctgcctggtgtgcagggagtcccacgct
caccgcctgcacgccgccgtccccattgaggaggcagtggaggagcagaaggagaaaatc
caggctcacgtgcagatcctgaaggaaaagaaggaaaagctgcaggggctgaaagaggct
gaggaagggaaaagcctggaattcctcgagaaggtccaacaggagaggcagaaggtggtg
ttggacatcaaggagctgcagcagttcgtggagcaacaggagcgtctcctcttggggcgg
ctggagaagctggaccaggaaatcgtgaggagaaaagaggagaacctggccaagctcctg
gaggagatttcctccgtcagtgagcagatccgtgagctggaggagaaatgccagcagcca
ccgtgtgaattcctgcaggacagcaggaacatcttgagcaggctggagaatgagaaatcc
cagcaggccccggagattttgcctggagcagaagaaaacccagccagccctcctcagaaa
aacacagctctcaaggagacgctgatgcagtttcgagaaagtctgacgttggaccccgac
acggcgcatccccggctggtcctgtccgaagaccaccgatgtgtgcgatgggaagaggcc
cggcaccccgtccctgacaaccccaaacgcttcgattcgtcccgctgcgttctgggctgc
caagggttcaacgcggggaggcactactgggaggtggaggtgggcgatggggaggcgtgg
gctgttggcgtggccaaggagtcggtggagaggaaggggcggatcagcgtcaaacccgag
gtggggatttgggcagtggggcaatgtggggcccagtatcaggctctcacttcacccacc
agccccatcacgctgcactctgcccccaaagtgattgggatttacctggattacgaggcc
gggcgagtggcatttttcgatgccaacaatgaggtgcccatttttgcgtaccctcccaca
tcttttggaggggagagggtccttccgctgctctgcctggggaggggctgccgcttcacg
ctgtccccgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (13)   
   RefSeq(nuc) (1)   
   GenBank (6)   
   EMBL (6)   
Protein domain (13)   
   Pfam (13)   
All databases (59)   

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