KEGG   Gallus gallus (chicken): 419869
Entry
419869            CDS       T01006                                 
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gga03041]
    419869 (DDX20)
Spliceosome [BR:gga03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    419869 (DDX20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 SiaC AAA_22 AAA_30 CMS1
Other DBs
NCBI-GeneID: 419869
NCBI-ProteinID: XP_417996
CGNC: 1040
Ensembl: ENSGALG00000001504
UniProt: F1P5C0
Position
26:3285239..3291571
AA seq 767 aa
MAAPAEGRFRTRDVLLPGGPSDFGSLLLSPPVLAGLEAAGFHRPSPVQLKAIPLGRCGLD
LIVQAKSGTGKTCVFSTIALDALLLDSPATQVLILAPTREIAVQIHAVITTIGIKMEGLE
CHVFIGGTPLSQDKVRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEEGS
FQEQINWIYSSLPANKQMLAVSATYPESLANALTMYMREPTFVRLNPTDPSLIGLKQYYK
IVNSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTSRGFPAECISG
SMNQSQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYMHRIGRAG
RFGTLGLSVTYCCRGEEENMMMKIAQKCNLQLLPLPEPIPPGMMDQFDDWEVEVKPVVYT
GASVNSDTVCLKPEEPVLQPVQNNSAEVPQPHSNLPVGNSSVEKPKNALEQKLVKKHTNS
AKVEKSSRNSKTSSCNTKQKNQVETVSRMAGQSNTEVPDEEALKRNLPRIPCLSSFKNQQ
NSPWNFSEFVEDYEYFIKEGLERDVEILRSFSGPGDQRELPRNGGIEWKEVECNRDTVAN
DVLSDDSDASYISRASSHGSENNSCFEAFSDRQAKNAVPTACQGLTGFCPTPGKLKELSQ
VPKQNQVKKKALKQNAKEKKKHSHQYPNPAPRKTGDDCSCGSWDDGVTGFPHEAWSYEDY
WKSYYQAWQNYYAAVSHFHYRRSYRHLMWMNAYVNSVYFQELLESGD
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggcggcgcccgctgagggccggttccgcacgcgggacgtgctgctgcccggcggcccg
tctgacttcgggtcgctgctgctgtcgccgccggtgctggcgggactggaggcggctggg
ttccacaggccgtcgcccgtccagctgaaggccatcccgctggggcgctgcgggctggat
ctcatcgtgcaggccaagtccggcaccggtaaaacgtgcgtcttctccaccatcgctctg
gacgcgctgctgctggacagcccggccacgcaggttcttatcttggctcccacacgagag
atcgctgtacagattcacgctgttatcacaacgattgggataaaaatggaaggtttggaa
tgccatgtcttcattggaggtactcctttgagccaggacaaagtcagactaaagaaatgc
cacatagcagttggctctccaggtcgcataaaacagctcatagagttggactacttgaat
actgccagtatccggctcttcattcttgatgaagcagacaagcttctggaagaaggcagc
tttcaggaacaaatcaattggatttactcttctctgccagccaataaacagatgcttgct
gtttcagctacttaccctgaatcgttagctaatgctttgacaatgtacatgagagaacca
acgtttgtgaggttgaatcctactgatccaagtctcattgggttgaagcagtattacaaa
attgtgaattcccatccacttccacataaaacatttgaggaaaaaacccagcacctacaa
gagttgttcagcaagattccatttaatcaagcattagtcttctcaaatttgcatagcagg
gctcagcatctagctgaaatactgacatccagaggctttcctgctgagtgcatttcaggc
agcatgaatcaaagccagcggcttgatgctatggctaaactaaagcaattccattgtaga
gttctgatttccacagacttgacatctcgtggaatcgatgctgaaaaagtgaatctggtc
atcaatctggatgtccctgtagactgggaaacatacatgcatcgtattggcagagctggg
cgctttggaactttgggcttatctgtgacatactgctgccgtggagaggaagaaaatatg
atgatgaaaattgctcagaaatgtaacctgcagcttcttcctttacctgagcctattcct
cctggaatgatggatcagtttgacgactgggaggttgaagtcaaacctgttgtatacaca
ggtgcttctgtaaattctgacactgtgtgtcttaaaccagaagaaccagtacttcagcct
gtccaaaataattctgcagaggtacctcagcctcattctaaccttccagttggtaattct
tctgtagagaagccaaaaaatgctttggaacaaaagctggtgaaaaagcacacaaattct
gctaaggtggaaaaaagcagcagaaactccaaaacctccagctgcaatacaaagcagaag
aatcaagtagaaactgtctccagaatggctgggcagagtaacacagaggttccagatgag
gaagccttaaaaagaaatctgcccagaattccatgcttatcatctttcaaaaaccaacag
aacagtccctggaacttctcagagtttgttgaagattatgagtactttattaaagaaggg
ttggagagagatgttgaaattttaagaagcttttcaggcccaggagatcaacgtgaactc
cccagaaatggtggtatagagtggaaagaggtggaatgtaatagagacacggtagcaaat
gatgttctgtctgatgacagtgatgcttcatacatttcaagggcttcctctcacggtagt
gaaaataactcttgctttgaagcattttcagacaggcaggcaaaaaatgctgtccccact
gcctgtcagggtcttacaggcttctgtcccacaccagggaagctgaaggagctatcacaa
gtcccaaagcaaaatcaggtgaaaaagaaagctctgaaacaaaatgccaaagaaaagaaa
aaacattcccatcagtaccctaatcctgcaccaaggaaaactggagatgactgctcctgt
ggctcttgggatgatggtgttactggctttcctcatgaggcgtggagttacgaagactac
tggaaatcttactatcaagcatggcagaactactatgctgcagtttctcactttcactac
aggagaagttacaggcacttgatgtggatgaatgcttatgtcaactcagtctactttcag
gaactgctggaaagtggtgattaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (8)   
   RefSeq(nuc) (4)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (46)   

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