KEGG T01006: 420120

Gallus gallus (chicken): 420120

Entry

420120 CDS T01006

Gene name

COMP

Definition

cartilage oligomeric matrix protein

Orthology

K04659

thrombospondin 2/3/4/5

Organism

gga Gallus gallus (chicken)

Pathway

gga04145	Phagosome
gga04510	Focal adhesion
gga04512	ECM-receptor interaction

Class

Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:gga04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:gga04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:gga04510]

SSDB

Motif

Pfam:

TSP_C TSP_3 EGF_CA COMP cEGF EGF_3 EGF EGF_MSP1_1 hEGF

Other DBs

NCBI-GI:

NCBI-GeneID:

CGNC:

Ensembl:

UniProt:

Position

AA seq 761 aa
MISALAFVFLLCLSCPFSSCQQRRAGIEVGPEMLEEMRETNRVLMEVRDLLKQQIKEITF
LKNTVMECDACGMRPEVTGPVITVTQFNRCVPNPCFPGVACTETSTGFRCGPCPPGYSGN
GSQCTDINECSANPCFPKVQCINTAPGFRCDPCPPGFTGQMVEGVGLAYARANKQVCTDI
NECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQITGCKSQTGRLCPNGQVSPCHEK
AQCIVERDGSISCACLVGWAGNGYICGKDTDIDGVPDEKLRCSDKKCRKDNCMTVPNSGQ
EDADRDGIGDACDDDADGDGILNAEDNCVYTRNADQRNADKDNFGDACDNCRLVKNDDQR
DIDGDGKGDECDDDIDGDGISNARDNCRRVPNPDQKDSDGDGVGDICDSCPTVSNPDQKD
TDHDLVGDVCDTNQDSDGDGHQDTRDNCPSVPNSSQVDTDNDGLGDECDDDDDNDGIPDE
KPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQT
VVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDY
AGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWH
TGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPEVVADTGVVLDTT
MRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFKVQQD

NT seq 2286 nt +upstreamnt +downstreamnt
atgatttcagctctagcctttgtttttctcctctgcctctcctgtcctttttcatcatgt
cagcagagaagagcaggaattgaagttgggcctgaaatgctggaagagatgagagaaact
aaccgtgtgttaatggaagttcgagacctgttgaaacagcagattaaggagataacattc
ctgaagaacacagtcatggagtgtgatgcctgtggcatgcgccctgaagtgacaggccct
gtcatcactgtgacgcagttcaacagatgtgtcccaaacccctgctttcctggagtggcc
tgcactgagaccagcactggcttccggtgtggaccctgtcctccaggttattcagggaat
gggtcccagtgcacagatatcaatgagtgcagtgcaaacccctgcttcccaaaggtccag
tgcattaacactgctcctggcttccgctgtgatccctgccctccaggcttcactgggcaa
atggtcgaaggggttggactagcttatgccagggccaacaaacaggtttgcactgacatc
aatgaatgtgagacaggtgctgccagaaattgtgtcccaaattctatctgtatcaataca
cggggatcatacaagtgcggagcttgtaaacctggctttgttggggatcaaatcactggc
tgcaagagccagacggggagactctgccctaacggtcaagtcagcccatgccacgagaaa
gcacagtgcatcgtggagcgggatgggtccatctcctgcgcgtgccttgtggggtgggca
gggaatggctacatctgtgggaaggatacagacattgacggagtccctgatgaaaagctg
cgctgctctgacaagaagtgccgcaaggataactgcatgactgtccccaactctggccag
gaggatgcagacagggatggaattggagatgcctgtgatgatgatgctgatggagatggg
atattaaatgctgaggacaactgtgtgtacacacgcaatgcagaccagcgcaatgcagac
aaggataactttggtgatgcctgtgacaactgtcgtctagtgaagaacgatgaccagcgg
gacattgatggtgatgggaaaggagatgagtgtgatgatgacatagatggagatgggatc
agtaatgcaagggacaactgtagaagagttcctaaccctgatcaaaaagatagtgatggt
gatggagtaggagatatatgcgacagctgcccaacagtcagtaacccagaccagaaagat
actgatcatgatctagtgggagatgtctgtgacaccaaccaggacagtgatggcgatggc
caccaagatacaagagataactgcccatcagtgcctaacagctcccaggtggacacagac
aacgatggactaggagatgaatgtgatgatgatgatgacaatgatgggattccagatgag
aaacctccaggccctgacaactgtcggcttgtccctaaccctggccaagaagattcagat
ggtgacggtgtaggaaatctttgcgaagatgactttgacagagacatggtgattgacagg
attgatgtgtgcccagagaacgcagaagtgacgctaacagacttcagggctttccagaca
gttgtgttggaccctgagggtgatgcacagattgaccccaactggattgtccttaaccag
ggcatggaaattgtccaaaccatgaacagtgatcctggcttggctgtaggttatacagca
ttcaatggagtggactttgagggcacattccatgtcaatactgccacagatgatgattat
gctggcttcatatttggctaccaggacagttccagcttttatgtggtcatgtggaagcag
atggaacagacatactggcaggcaaaccccttccgagcagtcgcagaacctggtattcaa
ctgaaggcagtgaagtccaaaacaggcccaggtgagtatctccgcaattctctctggcac
actggggacaccacagaccaggtcaaactgctgtggaaggaccctcgcaactctggctgg
aaggacaagacctcgtaccgctggttcctgcagcatcggcctcaagttggatacatcaga
gctcgcttctatgaaggccctgaggttgtagcagacactggagttgtccttgatacaact
atgcgaggagggcgcctgggagtcttctgcttctcccaggagaacattatttggtcaaac
ctgcgttaccgctgcaatgatactattccagaagactatgaaacatttaaagttcagcaa
gactaa

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   CGNC (1)   
   ENSEMBL-GGA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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