KEGG   Gallus gallus (chicken): 420813
Entry
420813            CDS       T01006                                 
Symbol
CTDP1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase
  KO
K15732  RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
Organism
gga  Gallus gallus (chicken)
Brite
KEGG Orthology (KO) [BR:gga00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gga01009]
    420813 (CTDP1)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gga03021]
    420813 (CTDP1)
Enzymes [BR:gga01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.16  protein-serine/threonine phosphatase
     420813 (CTDP1)
Protein phosphatases and associated proteins [BR:gga01009]
 HAD phosphatases
  Fcp/Scp phosphatases
   420813 (CTDP1)
Transcription machinery [BR:gga03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     420813 (CTDP1)
SSDB
Motif
Pfam: FCP1_C NIF PTCB-BRCT BRCT RTT107_BRCT_5 LIG3_BRCT Nairovirus_Gn HlyD_D23
Other DBs
NCBI-GeneID: 420813
NCBI-ProteinID: XP_418905
CGNC: 9601
Ensembl: ENSGALG00000031461
Position
2:complement(56379048..56480181)
AA seq 994 aa
MEEPAEKGGGSSAEGPAALIAEIRAPGPRPLRLLEWKVSVGAAVQIGSVLALCAPLPPAP
RPAAASPGSGASPRPQRSSTERKLKAERPGVVRELCARPGQVIAPGGVLVRLEGCSHPVV
MKGLCAECGQDLTQIRSKNGKQNVPLSTATVSMVHSVPELKVSSEQAEQLGREDQQRLHR
NRKLVLMVDLDQTLIHTTEQHCQQMSNKGIFHFQLGRGEPMLHTRLRPHCKEFLEKIAKL
YELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRDLFPCGDSMVC
IIDDREDVWKFAPNLITVKKYVYFQGIGDINAPPGSREIQMKKKINHSAKPEAQDSAVTL
AKDADEMKNVTCTEEQNNGLKKATKDMCTANGNTSVSSETPACDLSSHGKVNTQDSLSDS
TDDKTDSEITNNLSSTKESQISSEQVERTVLEKQRTQEKTSDLDFELSSDSESEGGLDTR
KSSTSVSDSENEEKRSWKKSKQPLQDENLQQGSCTDVSEKKDGQVNHSEGTESLPSENIL
DKTDIDVQEESEQESVCDLGNGCADKKEAETESQNSEQSGITMGESLDQSMEEEEEEDDT
DDDDHLMHLEEILVRVHTDYYTKYDKYLKKEIEEIPDIRKIVPELKSKVLADVTIIFSGL
YPTNFPIEKTREHYHATALGAKIVKNLVLSADDPDKATHLIAARTGTEKVRQAQDCKDLH
VVNPDWLWSCLERWDKVEEQLFPLKDDYIKTHRENSPATFPDTHSTFQTALFHPTPIHPK
SQPGPEVRLYDPNTGKLIRKSSQTSGQSMYIQSPTPPITLPVHGEHSSFRVVQPHQQQIF
EEDLPVTENEEQPGPSKRKRQPSMSETMPLYTLCKEDLESMDKEVDDILGEGSDESDSEK
KKPEEKGEKPQISATEATGVKTDQRPRSSSSSLSSSSSEKSLTGSVPRGHKRKLDEDDAA
SESSKESSNEDEEGSSSEADEMAAALEAELNDFM
NT seq 2985 nt   +upstreamnt  +downstreamnt
atggaggagccggccgagaagggcggcgggagctccgcggagggccccgcggcgctgatc
gcggagatccgggcgccgggcccgcggccgctgcggttgctggagtggaaggtgtcggtg
ggggcggcggtgcagatcgggtcggtcctggcgctctgcgccccgctgccgcccgccccg
cgccccgccgcagcctcgccgggctccggcgctagcccccggccccagcgctccagcacc
gagcgcaagctgaaggcggaacggcccggcgtagtgcgggagctgtgcgcgcggcccgga
caggtcatcgcgcccgggggtgtcttggtgagactggaaggatgtagccatccagtggtc
atgaaaggtttgtgtgcagaatgtggccaggacttgactcagatacgaagcaagaatgga
aaacagaatgtaccgttatccacagcaactgtgtctatggttcatagtgtcccagagctg
aaagtgagctctgagcaagctgaacagttaggaagagaagatcaacagcgactacacaga
aatcggaaactagtgcttatggtagatttggatcagacattgatccatactacagaacag
cactgccaacaaatgtctaataagggcatatttcatttccagttaggtcgaggtgagcct
atgctgcatactcgtttgcggcctcactgtaaggaattcctggaaaaaattgccaagctg
tatgagctgcatgtttttacttttggcagcagactttatgcacatacaattgcaggattt
ttggatcctgaaaagaagcttttttcccatcggatattatcaagggatgaatgtattgat
ccattttccaaaactgggaatcttagagatctcttcccatgtggggattccatggtttgt
atcattgatgacagggaggatgtctggaagtttgcacccaatttgataaccgtgaagaaa
tacgtatactttcaggggataggtgatattaatgcacctcctggatcaagagaaattcaa
atgaagaagaaaataaatcactctgctaagccagaggcacaggattcagcagtgacatta
gcaaaggatgccgatgaaatgaagaatgttacctgtacagaagaacaaaacaatggtcta
aagaaagctacaaaggacatgtgcactgcaaatggaaacacttctgtaagcagtgaaaca
cctgcatgtgatttgagctctcatggtaaagttaatactcaggactctttaagtgacagc
actgatgacaaaacagacagtgagatcactaacaatttgtcaagtactaaggaatctcag
atttcttctgaacaagttgagaggacggtgttagagaaacagcgaactcaagaaaagacg
agtgatttggactttgaactgtctagtgacagtgagagtgaaggtggattggataccaga
aagtcttctacttctgtatcagatagtgagaatgaggaaaagagaagctggaagaaatcc
aaacagcctctgcaggatgaaaatctacagcaagggagttgcactgatgtgagtgagaaa
aaagatggtcaggtgaatcattcggaggggacggaatctctaccaagtgaaaatattctt
gacaaaactgatattgatgtgcaagaagaaagtgaacaagaaagcgtttgtgatttagga
aatggatgtgcagacaagaaagaagctgaaacagagtctcagaatagtgaacagtctggt
attacaatgggtgagtccttggaccagagtatggaggaagaggaggaggaggatgataca
gatgatgatgaccatttaatgcatctcgaagagatccttgtgcgggttcacactgattat
tacaccaagtatgataaatacttgaaaaaggagatagaggaaattccagacatcagaaaa
atagtaccagaactgaaaagcaaagttttggcagatgtaaccattatctttagtggactc
tacccaacaaacttccccattgaaaaaacacgggaacactatcatgctacagcacttgga
gctaaaattgttaagaatctagtactgagtgctgatgatcctgacaaagcaacacatctc
attgcagcaaggacaggcacagaaaaagtacgacaagctcaggactgcaaagacctccat
gttgtaaaccctgactggctgtggagctgcctggagcgctgggacaaggttgaggaacag
ctgtttcccttgaaggatgactacatcaaaacacacagagaaaatagccctgccacgttt
cctgatacacacagcacatttcagacagctctgtttcacccaacacccatccatcccaag
tctcaacctggtcctgaagttcggctttatgatcctaacactggaaagctaatcaggaaa
agctctcaaacatctggccagtctatgtacatccagtctccaactcctcccatcacctta
cctgtccatggtgaacactcatccttcagagttgttcaaccacaccagcagcagatcttt
gaagaagacctaccagtgactgaaaatgaagagcaacctggtccatctaagcgaaaacgc
cagccaagtatgtctgagacaatgcccctgtacaccctatgtaaagaggatttagagagt
atggataaagaggttgatgacatcttaggagaaggcagtgatgaaagtgatagtgaaaaa
aaaaagccagaagagaaaggtgaaaaacctcagattagtgcaacggaggctacaggagtg
aaaacggatcagagacctcgatcatcgtcgtcatcgttatcatcatcatcaagtgaaaaa
agcttaacaggcagtgtacccaggggccataagcgcaaactggatgaagacgatgctgcc
agtgaatccagtaaagaatccagcaatgaagatgaggaaggaagcagttctgaagcagat
gagatggcagcagcacttgaagctgaactgaatgacttcatgtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   CGNC (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (8)   
   RefSeq(nuc) (2)   
   GenBank (3)   
   EMBL (3)   
Protein domain (8)   
   Pfam (8)   
All databases (58)   

Download RDF
DBGET integrated database retrieval system